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SCNpilot_expt_1000_bf_scaffold_3931_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 818..1333

Top 3 Functional Annotations

Value Algorithm Source
Transcription regulator, Lrp/AsnC family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQX4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 167.0
  • Bit_score: 302
  • Evalue 2.70e-79
  • rbh
Transcription regulator, Lrp/AsnC family {ECO:0000313|EMBL:EYR78546.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 167.0
  • Bit_score: 302
  • Evalue 3.80e-79
transcription regulator, Lrp/AsnC family; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 140.0
  • Bit_score: 116
  • Evalue 8.60e-24

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGGAACCGGAAATGAGCCAGCGCTACATCGTCGACGATCTGGACCGCGAGATCATCCGCTATCTCTCCGAGGACGGCCGTCTTTCGGCCGCCGAAATCGCCGGCCGGATCGGCAGCGTCTCCGAGCGCACGATCCGCAACCGCATCGCCGGCCTCCTTCAGGCCAAGATGATCGTGATCGGCGCCATTCCCGATCCCGTGGCGCTCGGGCGCGACGTGCAGGTCGAGCTGTTGATCGAGGTCGAGGCGGGCAAGCTGGAGGAGGTCGCCATCCAGCTCGGCGAATACGAGGAGATCGGCTACCTCGCCGCCACCAGCGGCACGGCCAATCTCAGCGCCTCGCTCTTCGTCGCCGACCATGCGGCGCTTCTCGAATTCATCGACCAGGAGCTGGGCAAGCTGCCCGGCGTCAAGCGCGTGACGAGCTCGGTCGTCCTGCGGCTCTACAAGGTATTCGGCACGAGGACGACCGCGATCAGCCGCGGCTCGGACCTCGGCGGCAAGAAGAAAGGATAA
PROTEIN sequence
Length: 172
MEPEMSQRYIVDDLDREIIRYLSEDGRLSAAEIAGRIGSVSERTIRNRIAGLLQAKMIVIGAIPDPVALGRDVQVELLIEVEAGKLEEVAIQLGEYEEIGYLAATSGTANLSASLFVADHAALLEFIDQELGKLPGVKRVTSSVVLRLYKVFGTRTTAISRGSDLGGKKKG*