name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_3931_curated_1
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..341)
|
Branched-chain amino acid aminotransferase; K00824 D-alanine transaminase [EC:2.6.1.21]
D-amino-acid transaminase n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FSI0_RHIML
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:CDH82699.1}; EC=2.6.1.21 {ECO:0000313|EMBL:CDH82699.1};; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3931_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
818..1333
|
Transcription regulator, Lrp/AsnC family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQX4_9RHIZ
rbh
Transcription regulator, Lrp/AsnC family {ECO:0000313|EMBL:EYR78546.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transcription regulator, Lrp/AsnC family; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
|
|
SCNpilot_expt_1000_bf_scaffold_3931_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1337..2881
|
Hydantoin utilization protein A n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C829_9RHIZ
rbh
Hydantoin utilization protein A {ECO:0000313|EMBL:EYR78545.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Hydantoinase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3931_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2878..3999
|
Putative hydantoinase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CNX2_9RHIZ
rbh
Putative hydantoinase {ECO:0000313|EMBL:EYR78544.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative hydantoinase; K09703 hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3931_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4034..5596
|
Putative D,D-dipeptide-binding periplasmic protein DdpA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXZ9_9RHIZ
rbh
Putative D,D-dipeptide-binding periplasmic protein DdpA {ECO:0000313|EMBL:EYR78543.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
extracellular solute-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3931_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5613..6635
|
Dipeptide transport system permease protein DppB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTD4_9RHIZ
rbh
ABC-type dipeptide/oligopeptide/nickel transport system permease component {ECO:0000313|EMBL:EYR78542.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
binding-protein-dependent transporters inner membrane component; K02033 peptide/nickel transport system permease protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3931_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6632..7471
|
Putative D,D-dipeptide transport system permease protein DdpC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQW9_9RHIZ
rbh
Putative D,D-dipeptide transport system permease protein DdpC {ECO:0000313|EMBL:EYR78541.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3931_curated_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7458..8411
|
Oligopeptide ABC transport system ATP-binding protein AppD {ECO:0000313|EMBL:EYR78540.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
oligopeptide/dipeptide ABC transporter, ATPase subunit
rbh
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JK24_STREN
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3931_curated_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8408..9163
|
Oligopeptide transport ATP-binding protein OppF n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EVZ9_9RHIZ
rbh
Oligopeptide ABC transport system ATP-binding protein OppF {ECO:0000313|EMBL:EYR78539.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC transporter
|
|
SCNpilot_expt_1000_bf_scaffold_3931_curated_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9270..10364
|
Integrase/recombinase XerD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CM93_9RHIZ
rbh
Integrase/recombinase xerD {ECO:0000313|EMBL:EYR81582.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative phage integrase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3931_curated_11
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10413..11543)
|
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035F53AC
rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL27082.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
substrate-binding component of ABC transporter
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3931_curated_12
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11595..12590)
|
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037333B7
rbh
ABC transporter permease {ECO:0000313|EMBL:KGM31453.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
ribose transporter permease RbsC
|
|
SCNpilot_expt_1000_bf_scaffold_3931_curated_13
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12587..13141)
|
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003827FF2
ABC transporter permease {ECO:0000313|EMBL:KGM31452.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
sugar ABC transporter permease; K10440 ribose transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_3931_curated_14
unknown
|
Not on your lists |
13246..13605
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3931_curated_15
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13550..15067)
|
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035EB53D
rbh
Wenxma_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ69242.1}; EC=3.6.3.17 {ECO:0000313|EMBL:KIQ69242.1};; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenxinia marina DSM 24838.;"
ABC-type sugar transport system
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3931_curated_16
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15064..15462)
|
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036EF3DC
Uncharacterized protein {ECO:0000313|EMBL:KGM30782.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
putative epimerase protein
|
|
SCNpilot_expt_1000_bf_scaffold_3931_curated_17
unknown
|
Not on your lists |
15662..15922
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3931_curated_18
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15873..17078
|
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003632EFE
rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB07038.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
AraC family transcriptional regulator; K02855 AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
|
|
SCNpilot_expt_1000_bf_scaffold_3931_curated_19
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17093..17779)
|
GntR family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX36_9RHIZ
rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EYR77384.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
GntR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_3931_curated_20
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18492..18713
|
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1N6_9RHIZ
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC transporter ATP-binding protein; K02052 putative spermidine/putrescine transport system ATP-binding protein
|