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SCNpilot_expt_1000_bf_scaffold_3931_curated_12

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(11595..12590)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037333B7 similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 320.0
  • Bit_score: 476
  • Evalue 2.60e-131
  • rbh
ABC transporter permease {ECO:0000313|EMBL:KGM31453.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 331.0
  • Bit_score: 384
  • Evalue 1.10e-103
ribose transporter permease RbsC similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 330.0
  • Bit_score: 264
  • Evalue 3.80e-68

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGAGCCCCGTCCCGCAGACCCCTTCCTCCCTTCGCCGCCCGGCACGCATCGCGGTCAATGCCGGCCTCGTGATCTTCCTCGCGCTCTATGCGGGCATCGCCTTCCTCCAGCCGAACTATCTGGAGCCGGGCCTCTTCATGAATTTCCTGCGGCGCGCCGCGCCGCTCGTCATCCTTGCCTGCGGGCAGCTCTACGTCATCCTGACGGGCGGCTTCGACCTTTCCATGGGAGCGGTCGCGACGCTGGTCGTGCTCGCCGCCTCGATCCTGATCAACGGCGATCCGGAGACGACCTGGGCGGTCATCGGCGTGCTCTATGCCATGGGCATCGCCGTCGGCCTCGTGAACGGCCTCGTCGTCGCCTTCCTCAAGGTGCCCTCGATCATCGCGACGCTCGGCACGATGCTCTCCGTCAACGGGCTGGCGCTCGCCTGGTCGGGCGGGGCGGCGCGCGGCGACCTGCCGGACAATTTCCGCAATCTCGGCCGTCTGGTCTGGCGCGACGTCCCCGTCCTCGGCGCGCTGCCGCTCGCGGCTATCGTCCTTGCCGGTTTCGTGGCGCTCGCCTGGTGGGGACTCAACGGCACCGTCTACGGCAAGCGGGCGCTCGCCGTCGGTGACAATCCGCGGGCGGCGGAGCTCGCCGGAACGCCGGTCGCCGCAACGCGCATCCTCGCCTTCGTGGTTTCCGCGGTCTCGNNNNNNNNNNNNNNNNNNNNNNNCGGCATCCTGATCGGCGGCTTTTCCGGCGTCTCCGTCAACGCCGGCGAGGGGCTGGAGCTGCAGGCCATCGCCGCCTGCGTCATCGGCGGCGCGCAGCTTCTCGGCGGGCGCGGCTCCATCTGGAGCGCGGTGTTCGGGGCGCTCAGCCTCTTCGCGCTCTTCACCCTGCTCAATCTCATCGGCCTGCCGCAGGCGCTGCGCGACAGCATCCAGGGCCTGATCCTGATCGCCGCGGTGGGCGCCAGCGTGGGGCGTGGCCGGCGGCGGACCTGA
PROTEIN sequence
Length: 332
MSPVPQTPSSLRRPARIAVNAGLVIFLALYAGIAFLQPNYLEPGLFMNFLRRAAPLVILACGQLYVILTGGFDLSMGAVATLVVLAASILINGDPETTWAVIGVLYAMGIAVGLVNGLVVAFLKVPSIIATLGTMLSVNGLALAWSGGAARGDLPDNFRNLGRLVWRDVPVLGALPLAAIVLAGFVALAWWGLNGTVYGKRALAVGDNPRAAELAGTPVAATRILAFVVSAVSXXXXXXXXGILIGGFSGVSVNAGEGLELQAIAACVIGGAQLLGGRGSIWSAVFGALSLFALFTLLNLIGLPQALRDSIQGLILIAAVGASVGRGRRRT*