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SCNpilot_expt_1000_bf_scaffold_3931_curated_11

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(10413..11543)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035F53AC similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 369.0
  • Bit_score: 621
  • Evalue 4.40e-175
  • rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL27082.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 371.0
  • Bit_score: 526
  • Evalue 3.50e-146
substrate-binding component of ABC transporter similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 366.0
  • Bit_score: 429
  • Evalue 1.00e-117
  • rbh

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Taxonomy

Devosia sp. 17-2-E-8 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1131
ATGACACTGAGGACACTTCTGGCGACGACCGTCGCGCTCACATTCGCCGGGCAGGCGCTGGCGCAGGACTTCAACGACCCGGCCGAGTTCAAGAAGCAGCGCGAGCAGCTTTCGATGACGCCGCAGGGACCGGAAGGCCAGCCCTGGGCGCAGCATCTCGGCGATGGCATGGTCGACACGGCGAAATACAGGAAGGATGGCCAGGTCACGCTCTGCTTCTCCAATGCCGGCGTCTTCAATCCCTGGCGCGTCGTCGGCCTCAACAATCTCAATGCCGAGGCCGAGCTGCACAAGGACCGCCTCAAGGAGCTGATCGTCGTCGATGCCGAGGGCAAGGACGACAAGCAGATTTCCGATATCGAGGCCCTCGTCAGCGGGGGCAAGTGCGATGCGCTGATCGTCTCGCCCAACACGACGGCGGCGCTCACCCCGGCGGTGGAAGCGGCCTGCGGCAAGCTCCCGGTCGTCGTCTTCGACCGCGGCGTCAATACGAGCTGCCCGGTGACCTATATCCATCCGGTCGGCGGCTACGGCTTCGGCATCACCTCGGGCGAGTTCATCGCCAGCAAGCTGAAGAAGGGCGACAACGTGCTGGCGCTGCGCATCATGCCGGGCGTCGACGTGCTGGAGACCCGCTATTCGGCCGCCAAGAACATCTTCGACGAGGCCGGCATCAACGTGATCGGCTCGGAATTCACCGGCAGCGACCGGGCCAAGACCAAGTCCGTCGTCGAGGACTACATCAACCGCGGCGAGAAGATCGATGCGGTCTGGATGGATGCCGGCGATACCGCGACGGCGGCGCTCGAAGCCTTCGAGGATGCGGGCCTTCCCTATCCGGTCATCAGCGGCGAGGACCAGCAGGACTTCCTGCGCAAGTGGCAGTCCGAGAAGCTGACGGCGATCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCCGTCATCGCAGCCCTCGACGTGCTGGACGGCAAAGCGGTTCCCGGCCCCGAATGGGTGCTGCCGCAGCCGGCGATCACCGAGGACGTTCTGGCGAACTATGTCGACGAGCGCATGCCGCCGCTGCACTACAGCCTCTGCGGCTGCCAGGAACTGCCGGGCTATCCGGAACGCTGGGGCGGCAAGAAGTAA
PROTEIN sequence
Length: 377
MTLRTLLATTVALTFAGQALAQDFNDPAEFKKQREQLSMTPQGPEGQPWAQHLGDGMVDTAKYRKDGQVTLCFSNAGVFNPWRVVGLNNLNAEAELHKDRLKELIVVDAEGKDDKQISDIEALVSGGKCDALIVSPNTTAALTPAVEAACGKLPVVVFDRGVNTSCPVTYIHPVGGYGFGITSGEFIASKLKKGDNVLALRIMPGVDVLETRYSAAKNIFDEAGINVIGSEFTGSDRAKTKSVVEDYINRGEKIDAVWMDAGDTATAALEAFEDAGLPYPVISGEDQQDFLRKWQSEKLTAIGXXXXXXXXXXAVIAALDVLDGKAVPGPEWVLPQPAITEDVLANYVDERMPPLHYSLCGCQELPGYPERWGGKK*