ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3931_curated_18

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 15873..17078

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003632EFE similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 340.0
  • Bit_score: 494
  • Evalue 8.60e-137
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB07038.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.5
  • Coverage: 329.0
  • Bit_score: 350
  • Evalue 2.80e-93
AraC family transcriptional regulator; K02855 AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 328.0
  • Bit_score: 248
  • Evalue 4.40e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia geojensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGCCGATATCCGCGCCGATGACGAGCAGGTTGAATGCGACCTTCACTGATGTCCTCCCCTTCGCCGCGCCGGCCTCTCCCATCGGCCTGCGCGACACGCCCCACAATGGCAGGCTTGACTCGGCAATTCTTGCGGACGACAACAGTGGTAAATTTCTTAAGTCATTTTGTGTTGGGAGGCGCGACGTGAACAGACATGCGGTGATTTCGCCGGCCGATTGCCGGCCCTCGGTCTTCCGCCAGCCGGACTCCGTCATGTATGCCGACAACTGCAAGGAATTGCAGGCCGCCGCCCGGCGCGGCGAGGTCGAGCTTCACGCCTGGACGCGCGGCAGCTATCCCGGCACCTCGCTCGGCGAGCGCCTGCCGGGCATCCGCACCGTCGGCTTCTGGGATGCGCGCCACGGCCAGTCCTGGGGGCTCGGCCGGCATTGCAACGAAGGCTTCAAGATCGCCTATCTCGCCCGCGGCAGCCTCGACCTCGTCGTGGACGAGCGGACCTATGCGCTCAAGCAGGGCCAGTTCATCGTCATCCGCCCCTGGCAGCTCCACTCCATCGGCAATCCGAATGTCGGGCCGAGCCGGCTCTTGTGGATCATCCTCGATGCGGGCCTGCGCCGGCCGAGCGAAACGCCCGACTGGCCGGACTGGCTCGTCTTCTACAGGGACGAGGCGGCGCGGCTCGGCGATATCCTGACGCAGAACAACCAGCCGGTCTGGGACGGCGGCGCCGAGCTCTGCCGCGCCTTCGAGGCCATTCCCTCCATCCTGCTCGAGCGCAGCCCGGAGGACGGCGAGACGCGCCTGAAGGTGGCGATCAACGCCATGATGCTGAGCCTGATCGACCGGATTGGCGAGCAGGCGCCGACGCTCGATCCCGATCTTTCGACCTCGCAGCACACCGTCGCGATCTTCCTGCGGCGGCTTGCCCATGCGCTGGAGGAGGACTGGTCGCTGGAAGGCATGGCCGAGGAATGCGGGCTCTCGCGCACCCGCTTTTCCGACTATTGCAAGAAGCTCACCAACATGGCGCCGCGCCAGTATCTCCAGCACCTGCGGCTGGAGCACGCCTCGCGCCTGCTGCAGGAGCCGCGCAACACCAGCGTCACCGAGATCGCGCTGAGCTGCGGCTTCAATTCGAGCCAGTACTTCTCCAACGCCTTCAAGAAGCGCTACGGCTATTCGCCGAGCAGCCATCGCGCCTGA
PROTEIN sequence
Length: 402
MPISAPMTSRLNATFTDVLPFAAPASPIGLRDTPHNGRLDSAILADDNSGKFLKSFCVGRRDVNRHAVISPADCRPSVFRQPDSVMYADNCKELQAAARRGEVELHAWTRGSYPGTSLGERLPGIRTVGFWDARHGQSWGLGRHCNEGFKIAYLARGSLDLVVDERTYALKQGQFIVIRPWQLHSIGNPNVGPSRLLWIILDAGLRRPSETPDWPDWLVFYRDEAARLGDILTQNNQPVWDGGAELCRAFEAIPSILLERSPEDGETRLKVAINAMMLSLIDRIGEQAPTLDPDLSTSQHTVAIFLRRLAHALEEDWSLEGMAEECGLSRTRFSDYCKKLTNMAPRQYLQHLRLEHASRLLQEPRNTSVTEIALSCGFNSSQYFSNAFKKRYGYSPSSHRA*