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SCNpilot_expt_1000_bf_scaffold_3931_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 6632..7471

Top 3 Functional Annotations

Value Algorithm Source
Putative D,D-dipeptide transport system permease protein DdpC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQW9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 279.0
  • Bit_score: 537
  • Evalue 1.10e-149
  • rbh
Putative D,D-dipeptide transport system permease protein DdpC {ECO:0000313|EMBL:EYR78541.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 279.0
  • Bit_score: 537
  • Evalue 1.50e-149
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 256.0
  • Bit_score: 302
  • Evalue 1.40e-79
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGACACGTCTCGTTCAACGCCTCGGCTGGCCCGGCACCATCGCCCTTGCAATCGTCGTCCTCTTCGTCGCGCTCGCGATCCTCGCGCCGTGGATCGCGCCCTATCCGGCGCAGGGCGCCGGCGCGCCGAACGTCATCGCCAAGCTTCGGCCGCCCTCGGCGGAGTACTGGCTCGGCACGGACCATCTCGGCCGCGACATCCTCAGCCGCATCATCTACGGCACCCGCGTCTCGCTGACCAACGGCGTGCTGATCGTCGCCTTCTCGCTGCTCATCGGCCTGCCGGTCGGCCTTGCCGCCGGCTATTTCGGCGGCTGGATCGACGAGGCGCTGATGCGCGGCACGGACGTCTTCCTCGCCTTCCCCGCCCTGCTGCTCGCCGTGCTGATGGCCGCCGCGCTCGGGCCGGGCTTCCTCAACAGCATCATCGCCGTCGCCGTCACCTGGTGGCCCTGGTATGCCCGCCTTGCCCGCGCGGAAGTGCTGGTGCTGCGCGGCCAGCCCTATGTCGAGGCCGCGCGCCTTGCCGGCGTCTCGCATCCGCGCATCATCATAAGGCACATCCTGCCCGCCACGGGCCGGCCGCTGACCGTCCAGGCCGCGCTCGACGTCGGCCCGGCGCTGCTGACGGCCGCCGCCCTCTCCTTCCTCGGCCTCGGCGTCCTGCCGCCGACCGCCGACTGGGGCCAGATGGTCGATGCCGGCCGCAAGTTCTTCCCGGCGCGCTGGTGGTATTCGGCCATGCCCGGCATGACGATCTTCATCGTGGCGCTTGCCTTCAGCGTACTCGGCGATGCCCTGCGCGAGCGCAAGGGAGGTGCCGCCCGTGCCTCTGCTTGA
PROTEIN sequence
Length: 280
MTRLVQRLGWPGTIALAIVVLFVALAILAPWIAPYPAQGAGAPNVIAKLRPPSAEYWLGTDHLGRDILSRIIYGTRVSLTNGVLIVAFSLLIGLPVGLAAGYFGGWIDEALMRGTDVFLAFPALLLAVLMAAALGPGFLNSIIAVAVTWWPWYARLARAEVLVLRGQPYVEAARLAGVSHPRIIIRHILPATGRPLTVQAALDVGPALLTAAALSFLGLGVLPPTADWGQMVDAGRKFFPARWWYSAMPGMTIFIVALAFSVLGDALRERKGGAARASA*