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SCNpilot_expt_1000_bf_scaffold_2123_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(2365..4887)

Top 3 Functional Annotations

Value Algorithm Source
Putative chemoreceptor y4fA {ECO:0000313|EMBL:EYR80418.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 840.0
  • Bit_score: 1419
  • Evalue 0.0
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00037EFBBF similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 830.0
  • Bit_score: 1015
  • Evalue 4.00e-293
  • rbh
chemoreceptor y4fA; K03406 methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 843.0
  • Bit_score: 1011
  • Evalue 1.40e-292
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2523
ATGTTCATTGACAAGATTCTCGCCCGCTTCAAGATCCAGACCAAGGTTCTTGTCTTCATCCTGCCTTTCGTTCTCAGCATCTGCGCGGTCGGATTCACCGGCCTTTACGCATCCGGCCTGCTGCAGGGCCGCATGGAGATTTCCAACAGCGTCCTCCAGTCGCTCAGCGGCTTCAAGGACGTCTATGCCGGCATGAACCGCTTCCTCCAGAACACCTCGGAGGAGAGCCGGGACGCCGTGCACCAGCGTCTCAACGCGCAGGGCGCCGTCCTGCAGGCGACGATGGATGCGCTGGCGCCCGATGCCGACAAGTCGCGCCTCGTGGATGCGCAGGCCCAGACCAGGGACATCGAGGCCCGCATGGACGGCCTGTGGGCGCTCTACGTCAACGAGACCGGCCTGCACGATGCGATGACGAAGAACCTCAACGCGCTCACCGCCGAGCAGGTCAAGATCCTCGACGAGGCCACGAAGCTCCAGCGTTCCGTGCGCCAGGACGAGAACAGCGCCAAGAGCATGCTGCGCGAGGCCGAGCGCCTGACCAATGCCGGCAAGTTCTTCGCCGATTTCCTCGCCGATTTCGGCAAGGGCGCGACGCCCGACGAGCAGTTGAAGCTGGTCAGGGAGCGCTACCCGCTGATTGCCAAGACCGACCGTTCGATCACGGCGATCCTGCCGAAGAGCCAGAAGGTCGTCTCCGTCACCATCCGCAACACGATCGAGGAACTCGGCGGCTTCCTGGCCTCGTCCGACCCGGCGGCCACCACCGTGCCTGAGATCGCGCGCCGCGTGAGCCGCTTCCGCCAGGTGGCCATCCAGCTCCAGGGCGCGGCCGCCGAGAAGATGCGCGAGGCGACCCGCATCTTCAGCGCGCTCGACGAACCGATCATCAAGTCCGAGGCGATCCTCGCCTCGACGCGCAAGCTGGTATCGACGATCGACGACATTAAGGTCGCCTCCGCGCGCTTTCTCGGCCAGACCTCGGATACGAACCGCGTCAAGCTTCTCGGTAACCTTTCCATCCTGCGCATCGACATCAAGAGCCTGCGCGGCAGCGCCAGCGGCCTGCCCTTCTTCGACGCGGTCGACGACGGCCTGACGCCGATGCTCGACCGGATCGAGGCCGACAGCGCCGCGCTGGTGAAGATCAGCACCGAGCGTGCCGCCGATTTCGAGGCCGCCGGCCAGTCGATCGACACGATCTGGAACCTGCTCAGCCAGTTCGCCGAGGAGCAGAAGACGAGCGCCGGCACCGAGCGGGAGAAGGCCAACCAGGTCTCGGTCGTCGCGACCGTCGCCGGTGCCGCGATCGCCGTGCTTGCCGGCATCGCCCTGGTGCTGACGCTGAAGGGGCCGATCGGCCAGATCACCGGCGCCATGCGCCGCCTTGCGGACGGCTTCCTCGATACCGGAATTTCCGGCGAGGGCCGCGCCGACGAGATCGGCGACATGGCCCGCGCGCTCGGCGTCTTCAAGGAGAACGCCCTGTCGAAGATCCGCATTGAGGAGGAGAGCGAGCAGCAGCGCGCCGCCGCGGAAACCGAACGCGCCCGCAACGACGCCGAAAAGCAGGCCCTCGACCGCCAGATCGACTTCGCCGTCGATGCGCTCGCCGCCGGCCTCGGCCGTCTCGCCCAGGGGGACCTGTCGCGCCAGATCGAGACGCCGTTCACCGGCCGCCTCGAGCAGCTCCGCCAGGACTTCAACTTCTCGCTCGTGCGCCTTCAGGACACGCTCGGCCAGATCCGCAACAATGCGCTGTCGATCCAGCGCAGCGGCTCGGACATGCTGCAATCGGCCGATGCGCTCTCCAAGCGCACCGAATCCCAGGCCTCCTCGCTGGAGGAGACGGCCGCGGCGGTCGAGCAGATCACCGCCACCGTGCGCTCCTCCGCCGAGCGGGCGCATGAGGCGAACCTCGTCGTCGGCACGACCAAGCGCAGCGCCGACAGCTCCGCGGAGGTCGTCAGCAACGCGATTGCCGCCATGGGCCGCATCGAGGGCGCTTCGCGCCAGATCGAGCAGATCATCGAGGTGATCGACGACATCGCCTTCCAGACCAACCTCCTGGCGCTCAATGCCGGCATCGAGGCCGCCCGCGCCGGCGAGGCCGGCAAGGGTTTCGCGGTCGTGGCGCAGGAAGTGCGCGAGCTCGCCCAGCGTTCGGCAAGTGCCGCCCGCGAGATCAAGGGCCTCATCGAGAAGTCGACGAGCGAGGTCAGCGCCGGGGCGCATCTCGTGCAGGAGACGGGGGCGGTGCTCGCCTCGATCAGCCAGCAGATCGTCACCGTCAGCCAGCATGTGGACATGATGGCGACCGCAAGCCGCGACCAGGCGGCCGCGCTGCAGGAGGTCAACGGCTCCGTCAACCAGATGGACCAGATGACCCAGCAGAACGCCTCGATGGTCGACCTGACGACCACGGCAAGCCGCAAGCTCGCGGGCGACGCCGACACGCTGATGATGCTGGTCGAGCAGTTCCGCCTGGAGGCGGACGAACAGGCCACGTATCGCGCTGCCTGA
PROTEIN sequence
Length: 841
MFIDKILARFKIQTKVLVFILPFVLSICAVGFTGLYASGLLQGRMEISNSVLQSLSGFKDVYAGMNRFLQNTSEESRDAVHQRLNAQGAVLQATMDALAPDADKSRLVDAQAQTRDIEARMDGLWALYVNETGLHDAMTKNLNALTAEQVKILDEATKLQRSVRQDENSAKSMLREAERLTNAGKFFADFLADFGKGATPDEQLKLVRERYPLIAKTDRSITAILPKSQKVVSVTIRNTIEELGGFLASSDPAATTVPEIARRVSRFRQVAIQLQGAAAEKMREATRIFSALDEPIIKSEAILASTRKLVSTIDDIKVASARFLGQTSDTNRVKLLGNLSILRIDIKSLRGSASGLPFFDAVDDGLTPMLDRIEADSAALVKISTERAADFEAAGQSIDTIWNLLSQFAEEQKTSAGTEREKANQVSVVATVAGAAIAVLAGIALVLTLKGPIGQITGAMRRLADGFLDTGISGEGRADEIGDMARALGVFKENALSKIRIEEESEQQRAAAETERARNDAEKQALDRQIDFAVDALAAGLGRLAQGDLSRQIETPFTGRLEQLRQDFNFSLVRLQDTLGQIRNNALSIQRSGSDMLQSADALSKRTESQASSLEETAAAVEQITATVRSSAERAHEANLVVGTTKRSADSSAEVVSNAIAAMGRIEGASRQIEQIIEVIDDIAFQTNLLALNAGIEAARAGEAGKGFAVVAQEVRELAQRSASAAREIKGLIEKSTSEVSAGAHLVQETGAVLASISQQIVTVSQHVDMMATASRDQAAALQEVNGSVNQMDQMTQQNASMVDLTTTASRKLAGDADTLMMLVEQFRLEADEQATYRAA*