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SCNpilot_expt_1000_bf_scaffold_2123_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5414..6595)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CFG9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 393.0
  • Bit_score: 721
  • Evalue 5.50e-205
  • rbh
Flavoprotein, HI0933 family {ECO:0000313|EMBL:EYR80416.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 393.0
  • Bit_score: 721
  • Evalue 7.80e-205
flavoprotein, HI0933 family similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 394.0
  • Bit_score: 575
  • Evalue 1.20e-161
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1182
GTGGCGGAACGGCGGGACGTCGTCATCATCGGAGCGGGCGCGGCGGGCATGATGTGCGCCATCGAGGCGGGCCGGCGCGGCCGCCGCGTGCTGGTGCTCGACCATGCCCGTGCGCCCGGCGAGAAGATCCGCATTTCCGGCGGCGGCCGCTGCAACTTCACCAATATCCATGCCGGGCCGAAGAACTTCCTCTCGGCCAATCCGCATTTCTGCAAGTCGGCGCTCGCCCGCTATACGCCGCGCGATTTCCTCGCCCTCGTCGAGCGCCACCGCATTCCCTGGCACGAAAAGACGCTCGGCCAGCTCTTCTGCGACAATTCGGCGAAGGACATCATCGCCATGCTGCTGGCGGAGATGAAGGCGGCGGGCGTGGAACTGCGGCTTTCGACGCCGATCGCCGCCGTCGAACACGATGGCGAAGTCTTTCGCGTCGTCACCGGTGAGGGAACGGTGGAAGCGTCGTCGCTGGTCATCGCGACCGGCGGCAAGTCGATCCCCAAGATGGGTGCGACCGGCTTTGCCTATCGCATCGCCGAGCAGTTCGGCCTGCCCGTCGTGGAAACCCGCGCCGGCCTCGTCCCGCTGACGCTCGACCCGGCGACGCTTGCCGCCCACGAAGGCCTGCCCGGCGTCTCGGTGGAGGCCGTCGCCCGCCATGGCAGGGCGGAATTCCGCGAGGCGGCGCTCTTCACCCATCGCGGCCTCAGCGGCCCCGCCATCCTGCAGATCTCGTCCTACTGGCGCGAGGGCGAGGAAATCGCCCTCACCATCTGCCCGGACGTCGATTTTTCCGCCGTCATCGCCGCCGCCCGGCGGCAGAACGGCCGGCAGGCGCTGCAAACCGTCCTGGCCGATCACATGCCGAAAAAGCTCGCCCAACTCCTCGTCGCCGAGATCGGCATCGACGGGCCGCTTGCCGAGCTTCCCGGCCGCCGCGTCGAGGCGCTCGTCCAGCGCCTCGGGGACTGGCGCCTGCGCCCACCGGGCTCGGAAGGGTATCGCACGGCCGAGGTCACCCTCGGCGGGGTCGATACGGCAGCGCTGGATTCCCGCAGCATGGCGGCAAAGGCGGTGCCGGGCCTCTATTTCATCGGCGAGGCGGTGGACGTGACGGGCTGGCTCGGCGGCTACAATTTCCAGTGGGCATGGGCCTCGGGCCATGCGGCGGGCCAGGAAGCCTGA
PROTEIN sequence
Length: 394
VAERRDVVIIGAGAAGMMCAIEAGRRGRRVLVLDHARAPGEKIRISGGGRCNFTNIHAGPKNFLSANPHFCKSALARYTPRDFLALVERHRIPWHEKTLGQLFCDNSAKDIIAMLLAEMKAAGVELRLSTPIAAVEHDGEVFRVVTGEGTVEASSLVIATGGKSIPKMGATGFAYRIAEQFGLPVVETRAGLVPLTLDPATLAAHEGLPGVSVEAVARHGRAEFREAALFTHRGLSGPAILQISSYWREGEEIALTICPDVDFSAVIAAARRQNGRQALQTVLADHMPKKLAQLLVAEIGIDGPLAELPGRRVEALVQRLGDWRLRPPGSEGYRTAEVTLGGVDTAALDSRSMAAKAVPGLYFIGEAVDVTGWLGGYNFQWAWASGHAAGQEA*