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SCNpilot_expt_1000_bf_scaffold_2123_curated_15

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 12662..13783

Top 3 Functional Annotations

Value Algorithm Source
Phosphogluconate dehydratase Edd n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D948_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 373.0
  • Bit_score: 695
  • Evalue 2.40e-197
  • rbh
Phosphogluconate dehydratase Edd {ECO:0000313|EMBL:EYR80411.1}; EC=4.2.1.12 {ECO:0000313|EMBL:EYR80411.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 373.0
  • Bit_score: 695
  • Evalue 3.30e-197
phosphogluconate dehydratase (EC:4.2.1.12); K01690 phosphogluconate dehydratase [EC:4.2.1.12] similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 372.0
  • Bit_score: 621
  • Evalue 1.40e-175
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
ATGCTGATGGAGATCATGGGCTTCCACATGCCCGGCGCCTCCTTCATCAATCCCGGCACGCCGCTGCGCGACGCGCTGACGAAGGAAGCCGCCAGGCGCGCGCTCGCCATCACCGCCGAGGGCAACGAGTTCACGCCGGCCGGCGAGATGATCGACGAGCGCTCCATCGTCAATGGCGTCGTCGGCCTGCACGCCACGGGCGGCTCGACCAACCACACGCTGCACCTCATCGCCATGGCGCGCGCCGCCGGCATCCTGCTGACCTGGAAGGACATTTCCGACCTTTCGGACGTCGTGCCGCTGCTTGCCCGCGTCTACCCCAACGGGCTTGCCGACGTGAACCATTTCCACGCGGCGGGCGGCATGGGCTTCCTCATCCAGGAGCTCCTGAAGACCGGCATGCTGCACGACGACGTGCGCACCGTCTACGGCCAGGGCCTTCAGGCCTACACGATCGAGCCGAGGCTCGGCGGAAACGGCACCGTGCACCGCGAGCCGGCGCCGAAGGTCAGCCACGACCCGAAGGTCCTCGCCAGCATCGAGGCGCCCTTCCAGCCGACGGGCGGCCTGAAGATGCTGACCGGCAATATCGGCAAGGCGGTGATCAAGATCTCAGCCGTCAAGCCGGAGCGCCACGTCATCGAGGCGCCGGCCAAGGTCTTCCACGACCAGCAGGAACTCAATGTCGCCTTCAAGAACGGCGAGCTGACGGGCGATTTCATCGCGGTCGTGCGCTTCCAGGGCCCGAAGGCCAACGGCATGCCGGAACTGCACAAGCTGACCACCGTGCTCGGCATCCTGCAGGACCGCGGCCAGCGCGTGGCGCTGCTCACCGACGGGCGCATGTCCGGCGCCTCCGGCAAGGTCCCAGCCGCCATCCACGTGACGCCCGAGGCGGTCGACAACGGCCCGATCGGCCGCATCCGCGAAGGTGACACGATCCGGCTGGATGCCGCAAACGGCACCATCGAGGTCCTGGTGGACGCCGCCGAGTTCGCCGCGCGCCCGCAGGCTGCGGCCGACCTCTCCGGCAATGAATTCGGCATGGGCCGCGAACTCTTCGCCCCCTTCCGGGCGATTGCGGGGCCGGCGGATCACGGGGCGAGCGTGCTGTTCGCGTAA
PROTEIN sequence
Length: 374
MLMEIMGFHMPGASFINPGTPLRDALTKEAARRALAITAEGNEFTPAGEMIDERSIVNGVVGLHATGGSTNHTLHLIAMARAAGILLTWKDISDLSDVVPLLARVYPNGLADVNHFHAAGGMGFLIQELLKTGMLHDDVRTVYGQGLQAYTIEPRLGGNGTVHREPAPKVSHDPKVLASIEAPFQPTGGLKMLTGNIGKAVIKISAVKPERHVIEAPAKVFHDQQELNVAFKNGELTGDFIAVVRFQGPKANGMPELHKLTTVLGILQDRGQRVALLTDGRMSGASGKVPAAIHVTPEAVDNGPIGRIREGDTIRLDAANGTIEVLVDAAEFAARPQAAADLSGNEFGMGRELFAPFRAIAGPADHGASVLFA*