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SCNpilot_expt_1000_bf_scaffold_2123_curated_19

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 17891..18517

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:KFL27715.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 206.0
  • Bit_score: 236
  • Evalue 3.10e-59
transcriptional regulator RafR similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 198.0
  • Bit_score: 210
  • Evalue 5.30e-52
Transcriptional regulator RafR, putative n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAC1_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 198.0
  • Bit_score: 210
  • Evalue 1.70e-51

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Taxonomy

Devosia sp. 17-2-E-8 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGCGGCGGCCGTTCGTGGTGCATGGCCGCGAGGCGCGCTCGACCCAGTACGGCTGGGTCGACATCGACAACTACGCCAACTTCTACAACCTGACGCGGCTGCTGATCGCCAACGGGCACCGGCATATCGCCTTCATCAACGGCGACGAGCATTTCACCTATGCGCTTTACCGCCGCCGTGGCGTCGTCGACGCCCTGCTCGACGCCGGGCGCAGCATTTCGGACCTGACGGTACTCAACACGCTGCACCCGATGGGCGACGCGGGCTTCAAGCTCACGACGCTGGCGCTCGCCGACCCGCGCATCACCGCGATCCTCTACTCATCGACGCTGATGGCGGTGGAAGGCCACGCGGCCGTGGTTCGGGCGGAGGCCGAGAACCGCCGGGTCGAGATCGCCACCATGGACGACGAATTGCACTACATCGACCTGTCAGGCTTTGCCGGCGACTGGTCCTATGTCCGATCGTCGCTGCGCGAAGCCGGCGGCGTGCTCATCGCCGAACTGCTCAACCAGTGCGAGAGCGGTGCACCGGCGCGCGGCCACATCGTGCCTTCGACGTTCCACCTGCTGCCCAAGCTGGATGGGCGGGTGCTCAGCGAACCGTTGCCGCTGAACCGGCGCTGA
PROTEIN sequence
Length: 209
MRRPFVVHGREARSTQYGWVDIDNYANFYNLTRLLIANGHRHIAFINGDEHFTYALYRRRGVVDALLDAGRSISDLTVLNTLHPMGDAGFKLTTLALADPRITAILYSSTLMAVEGHAAVVRAEAENRRVEIATMDDELHYIDLSGFAGDWSYVRSSLREAGGVLIAELLNQCESGAPARGHIVPSTFHLLPKLDGRVLSEPLPLNRR*