ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2123_curated_22

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(20395..20526)

Top 3 Functional Annotations

Value Algorithm Source
ABC alpha-glucoside transporter, inner membrane su bunit AglF {ECO:0000313|EMBL:CDP52765.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 43.0
  • Bit_score: 73
  • Evalue 7.30e-11
alpha-glucoside ABC transporter permease n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030AD139 similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 41.0
  • Bit_score: 61
  • Evalue 2.70e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 132
ATGTTCAAGTGGATGTTCGTGAACTTCGACAACGGCCGTGGTTCGGCGATCGCGGTGATCATCATGCTCGCCGTCCTGCCGATCATGATCTGGAACATCCGCCGGGCCAACGCTGAAGAGGGGACACGCTGA
PROTEIN sequence
Length: 44
MFKWMFVNFDNGRGSAIAVIIMLAVLPIMIWNIRRANAEEGTR*