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SCNpilot_expt_1000_bf_scaffold_5289_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 527..892

Top 3 Functional Annotations

Value Algorithm Source
Dipeptide transport system permease protein dppC n=3 Tax=Ochrobactrum RepID=C4WPT8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 121.0
  • Bit_score: 224
  • Evalue 5.00e-56
Putative permease component of ABC transporter {ECO:0000313|EMBL:AHK47626.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 121.0
  • Bit_score: 224
  • Evalue 7.10e-56
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 119.0
  • Bit_score: 145
  • Evalue 9.40e-33

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Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
GTGCGCTCGCAGACGCTGGCGGTGAAGGAGAAGGAATTCATCGAGGCCGCCCGCGCCAACGGTACCTCGCGGGTGACGATCATGTCGCGCCACGTCTTCCCCAACGTGGTGCCGACGCTGATCGTGCTCTTCTCGCTTTCCATCCCCGAGGCGATCATGTGGGAATCCAGCCTCAGCTTCCTCGGCGTCGGCGTGCAGCCGCCGGAGGCGAGCTGGGGGCTGCTCGTGGCCAAGGGCAAGGAATATCTCTTCGCAGCGCCCCTCGTGGCGATCATGCCCGGCGTCGCGATCCTCGTCACGGTGCTGGCGTTCAACTTTGTCGGCGACGGGCTGCGCGATGCCCTCGATCCCTACATGAAGGACTGA
PROTEIN sequence
Length: 122
VRSQTLAVKEKEFIEAARANGTSRVTIMSRHVFPNVVPTLIVLFSLSIPEAIMWESSLSFLGVGVQPPEASWGLLVAKGKEYLFAAPLVAIMPGVAILVTVLAFNFVGDGLRDALDPYMKD*