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SCNpilot_expt_1000_bf_scaffold_5289_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 3518..5074

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000368112A similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 517.0
  • Bit_score: 782
  • Evalue 3.50e-223
  • rbh
Beta-lactamase {ECO:0000313|EMBL:ENN84943.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 514.0
  • Bit_score: 671
  • Evalue 1.20e-189
D-aminopeptidase; K01266 D-aminopeptidase [EC:3.4.11.19] similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 513.0
  • Bit_score: 606
  • Evalue 8.20e-171
  • rbh

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1557
ATGCTCGATTTTGCGGCGCTCGAACGGGCGCTGAACCGCCTGCCTCTTCGCTTTCGCGGGCCAGGCGGGGTGGCCGGCATCGTCAAGGACGGCAAGGTGGTGGCGCGGCGCGCCTGGGGCTTTGCCGACATGTATCGCCGCCTGCCGATGACGGCGCAAACGCGCCTGCCGATCTGCTCGATTTCCAAGCAGTTCACCTGCGCGCTGCTGCTCGACCAGTTCGGCGACCCCGCCGTCCTCGACGGGACGGTCGGCGATTTCCTGCCGCTCTACCGCGACCGGCTGCCGACCGTCGCGCAGCTCTGCCACAACCAGTCGGGGCTGCGCGACTACTGGGCGCTGACCGTGCTGCACGGCGCCTATCCCGAGGCGGAGTTCCGCCGCGAGGACGCTCTGCCTCTCATCGCCAGCGCCAAGACGGGGCACTTTCCGGCCGGCGCGCACTATTCCTACAGCAACGGCAATTTCCGCATTCTCGGCGAGATGATCGAGCGCGGCACGGGGCGGGATTTCGCCGACCTCCTCGCCGAGCGCCTGTTTGCGCCCGCCGGCATGTCCACCGCGGTGCTCGCGCCGGACGCCCGCGTGCCGCTTGACGGCGTCGTCGGCTACGAGGGCAACGACGATGTCGGCTTCCTGCCCGCCGACAACGGGGTCTACTGGTTCGGCGACGCCGGCATTTCCGCCTCGCTCGACGACATGCTCGCCTGGGAATGCCATATCGACGCGACGCGCGACGATCCCGAAAGCCTCTACAACCGCCTCTCGGCGCCCGCCTTCTATGCGGACGGCGCGCCGGCGACCTATGCCTACGGCCTGCGCCGGGACATCCATAACGGCCTGGAATTCACCGGCCATGGCGGTGGCCTGCGCGGCTTCAGCTCCTATCGCATGCATGTGGCCGGGGAACGGCTGTCCGTCGTGGTGATCTTCAACCACGACACCAGCACCTTCACCGCCGCCGCCGCGCTGGTCGATGCCGCGCTCGGCCGTGAAAGCCGGAGCGAGGCCGTGCGCCCCGAGGATTGGGACGGCCTGTGGCTGGACGAGGCGCAGGGGCTTGTCGTGCGGACGGCGGCGGATGCGACGGGCGTGAGGCTCCATTACGGGCCCTCTTCCGCGCGGGCGACGCTGTCGTCCGAGGGCAGCGCCCGCGGCCAGGGGCTGACCCTGCGCAAGGAGGAGAACGCGCTTGTCATGCAGCGGGAGAGCGAGCATCTGACCGTCCGCGCCCGCCGGATCCAGCCGGTCGAATGGGCGGACCCCGCACCCGTTGCCGGCCGTTACTGGTCGGAGGAACTGGAGGCCTGGCTGGAGATCGAGGCCCGCGACGGCGCGGCCTTCGCGGTCTTCGAGGGGCTTTACGGAAAGGGCCCGATGGAGCGCATGTATGCGCTCGCCGCCGACGTCTGGATCATAACCAGCCGCCGCGCCATCGACGCGGCGGCGCCGGGTGACTGGACGGTGCTGGTGGAACGGGACACGGCCGGCACGATCACGGGCCTCAGCATCGGCTGCTGGCTGGCGCGCCGAATAAGCTATCGCCCCGCATCATGA
PROTEIN sequence
Length: 519
MLDFAALERALNRLPLRFRGPGGVAGIVKDGKVVARRAWGFADMYRRLPMTAQTRLPICSISKQFTCALLLDQFGDPAVLDGTVGDFLPLYRDRLPTVAQLCHNQSGLRDYWALTVLHGAYPEAEFRREDALPLIASAKTGHFPAGAHYSYSNGNFRILGEMIERGTGRDFADLLAERLFAPAGMSTAVLAPDARVPLDGVVGYEGNDDVGFLPADNGVYWFGDAGISASLDDMLAWECHIDATRDDPESLYNRLSAPAFYADGAPATYAYGLRRDIHNGLEFTGHGGGLRGFSSYRMHVAGERLSVVVIFNHDTSTFTAAAALVDAALGRESRSEAVRPEDWDGLWLDEAQGLVVRTAADATGVRLHYGPSSARATLSSEGSARGQGLTLRKEENALVMQRESEHLTVRARRIQPVEWADPAPVAGRYWSEELEAWLEIEARDGAAFAVFEGLYGKGPMERMYALAADVWIITSRRAIDAAAPGDWTVLVERDTAGTITGLSIGCWLARRISYRPAS*