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SCNpilot_expt_1000_bf_scaffold_5289_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(8161..9393)

Top 3 Functional Annotations

Value Algorithm Source
FAD dependent oxidoreductase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C1B9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 407.0
  • Bit_score: 468
  • Evalue 5.20e-129
  • rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:EYR83943.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 407.0
  • Bit_score: 468
  • Evalue 7.30e-129
FAD-dependent pyridine nucleotide-disulfide oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 402.0
  • Bit_score: 408
  • Evalue 2.60e-111
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1233
ATGTCGCTGGTCCCGGACGAAGGCGACCATTTTCAGCGGTGGCTTGCGGGGAGCGGGGTTCTTGCCGCCGATCCGGATGCCGTCACGCCGGGCGGGCTTGTCTTCGCGCGCCGCTCGGCATTCGGCTCGTATGCCGCCGCAAGCCTTGCCCCGCTGGTCGAAAGCGGCGCGCTCGAGCATTGCCGCGATCCTGTCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGGGGACGGTGGGGCGCTGGAAGCCGATATCGTCGTCATCGCGACGACGCATCCCAGTCCGTCGCCGCCGTCCATGGTCGATCGCGCGCTTTCAGGCCACGCAGGCTACATCCCCGATGCCACGGTTCCCCGCGCCCTCGTGGACATTGGCAGGGACGACCGGGTGCTGATCATCGGCATGGGGCTTACCGCCGCGGATGTCATTGCGACGCTCGATGCCGGGGGCCATCGGGGCAGGATCACGGCCGTCTCGCGCCGCGGCCTTCGCTCGCGCGGGCATAACCTTTCGCCCCAGGAACCATTCGGCGAGTTTGCCGATCCCCCGTCGCGTTCGGCGCGCGCCCTGCTCCGGCGCGTGCGCGACAGCGTGGCCGTGGCCGAGGCTTCGGGGCTTTCCTGGCATGCGGTTTTCGACCAGCTTCGCAAACAGGGCGGCGATATCTGGCGTGCGTTGCCGATCGTGGAGCGCCGGCGCCTCGTACGCTACCTTCGGCCGTTTTGGGATGTGCACCGATTCCGTATCGCACCCCAGGTGGAGGCGATCATCGAGCGACGGCTGGCGGACGGGACCCTCTCGTTTCACGCCGCGGCCATCGCCGGCGTGAAACGCAGCGGAGGAGGCGCCGTTTCTGTAGACTTTCGCCCGCCCCATGCACGTCAGCCGTTCCAGGAGCAGTACGACAGCGTGGTCGTGACGACCGGCCCGGCCCACGGGGCCGTTCTCTCAAGCCAATCGTTCCTTAAAGGCCTTTCGGATGCGGGGAGGCTGCAGCCGGATGCCGTCGGGCTCGGCATCGCCGTCGACGGACAAAGCCGTGCCATCGATGCGACCGGGCAGGTGGCGGACAATCTCTATATCGCCGGCCCGCTGGCGCGCGGCACGTTCGGGGAACTGATGGGCCTGCCCCAGGTGGTAAATCATGCCGCTTTCGTCTCTGAAAGCATCGCAAGCCGGGTGAGATCGCTGGCCAGCCTGCCTTGCCCTTCACGCTAG
PROTEIN sequence
Length: 411
MSLVPDEGDHFQRWLAGSGVLAADPDAVTPGGLVFARRSAFGSYAAASLAPLVESGALEHCRDPVXXXXXXXXXXXXXXAGDGGALEADIVVIATTHPSPSPPSMVDRALSGHAGYIPDATVPRALVDIGRDDRVLIIGMGLTAADVIATLDAGGHRGRITAVSRRGLRSRGHNLSPQEPFGEFADPPSRSARALLRRVRDSVAVAEASGLSWHAVFDQLRKQGGDIWRALPIVERRRLVRYLRPFWDVHRFRIAPQVEAIIERRLADGTLSFHAAAIAGVKRSGGGAVSVDFRPPHARQPFQEQYDSVVVTTGPAHGAVLSSQSFLKGLSDAGRLQPDAVGLGIAVDGQSRAIDATGQVADNLYIAGPLARGTFGELMGLPQVVNHAAFVSESIASRVRSLASLPCPSR*