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SCNpilot_expt_1000_bf_scaffold_1900_curated_25

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(18132..19730)

Top 3 Functional Annotations

Value Algorithm Source
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 532.0
  • Bit_score: 1007
  • Evalue 5.60e-291
aspartate oxidase n=1 Tax=Rhizobium giardinii RepID=UPI0003767F07 similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 532.0
  • Bit_score: 906
  • Evalue 1.60e-260
  • rbh
nadB; L-aspartate oxidase (EC:1.4.3.16); K00278 L-aspartate oxidase [EC:1.4.3.16] similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 532.0
  • Bit_score: 892
  • Evalue 5.90e-257
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1599
ATGCCCATGGAAAGTTTCCGCCCGCAATCGTGGAACGGCATCGATGACATCGTCATCGTCGGCGGCGGCCTTGCCGGCCTGTTCTGCGCGCTGAAGCTCGCGCCGCGCCCCGTCACGATCCTTGCCGCCGCGCCTATCGGGCAGGGCGCGTCCTCGGCCTGGGCGCAGGGCGGCATCGCCGCGGCCATGAGCCCGGGCGACACGTTCGACAAGCACGTCGCCGACACGCTGGAGGCGGGCGCCGGCATCGTCGACGAGAAGATGGCGCGCTTCATGGTCTCCGAAGGCCCGGCGCGCATCCACGACCTCCTCGAATACGGCGTGCCCTTCGACCGCGACCTCGAAGGCCAGCTCCTGCTTTCCCGCGAGGCCGCCCATTCCGAGCGCCGCATCGTGCGCGTGAAGGGCGACATGGCCGGCAAGGCCATCATGGAGGCGCTGATCGCGGCCGTGCGCAACACGCCGTCGATCCGCGTGCTGGAAGGCTACGTCGTCGAGGAGCTGGTGCGCGAAGGCCGCTTCATCTCGGGCGTCGTCGCCCGGCCGGATGCCGGCCAGTCGAAGAACCGCGTGCATTTCCCGGCCCGCGCCGTGGTGCTATGCTCGGGCGGCGTCGGCCATCTCTTCGCCGTCACCACCAATCCGTGGGAGGCCTGCGGCCAGGGCGTCGGCATGGCGGCCCGCGCCGGCGCGATCATCGCCGACCCGGAATTCGTGCAGTTCCACCCGACCGCCATCAATATCGGCCGCGATCCCGCCCCGCTCGCCACCGAGGCGCTGCGCGGCGACGGGGCGCATCTCGTCAATGCCGCCGGCCACCGCTTCATGCTTGATATCCACGAGGACGGCGAACTCGCCCCGCGCGACATCGTCTCGCGCGGCGTCTTCGCCGAGGTGCAGGCCGGCCGCGGCGCCTTCCTCGATTGCACCAAGGCCGTCGGCGCGCATTTCCCGGACATGTTCCCGACCGTCTACGCCTCCTGCATCGCCGCCGGCATCGATCCGGTGACCCAGCCGATCCCTGTCGTGCCGGCCGTGCACTACCACATGGGCGGCGTGCTGACGGATGCGGAGGGCCGCACCTCCATCGACGGCCTGTGGACCGCCGGCGAGGTCACGTCCACCGGCGTGCATGGCGCCAACCGCCTTGCCTCCAACTCGCTGCTCGAGGCCGTCGTCTTCGCCGCCCGCATCGCGGAGAACATCAAGGGCATCCTGCCCGAGCCGAAGATCAACGACTGGGGCAAGAATGCCGGCGAGAGCGACGACCTCGTCACCATCGAGGACAGCCCGGCGCTCACCCGCCTGCGCCGCATCATGAGCGACAAGGCCGGCGTCATCCGCAGCCGGGAGGGCCTTGCGGCCGCCATCCGCGAGATCGCCGTGCTGGAGCGCGAGAACAGCCGCATGCGCTTCCACAACATCGTCACCACCGCCAAGCTCATCACCGTCGGCGCCTGGCTGCGCGAGGAAAGCCGCGGCGGCCATTTCCGCTCCGATTTCCCCGAGCAGAAGGCCGCCTGGAAGCACCGCACCTTCCTCACGCTGGCCGACGCCGAGGCGGTCGTCGCCGAACTTTCGCAGACGGCGGCGGCCTGA
PROTEIN sequence
Length: 533
MPMESFRPQSWNGIDDIVIVGGGLAGLFCALKLAPRPVTILAAAPIGQGASSAWAQGGIAAAMSPGDTFDKHVADTLEAGAGIVDEKMARFMVSEGPARIHDLLEYGVPFDRDLEGQLLLSREAAHSERRIVRVKGDMAGKAIMEALIAAVRNTPSIRVLEGYVVEELVREGRFISGVVARPDAGQSKNRVHFPARAVVLCSGGVGHLFAVTTNPWEACGQGVGMAARAGAIIADPEFVQFHPTAINIGRDPAPLATEALRGDGAHLVNAAGHRFMLDIHEDGELAPRDIVSRGVFAEVQAGRGAFLDCTKAVGAHFPDMFPTVYASCIAAGIDPVTQPIPVVPAVHYHMGGVLTDAEGRTSIDGLWTAGEVTSTGVHGANRLASNSLLEAVVFAARIAENIKGILPEPKINDWGKNAGESDDLVTIEDSPALTRLRRIMSDKAGVIRSREGLAAAIREIAVLERENSRMRFHNIVTTAKLITVGAWLREESRGGHFRSDFPEQKAAWKHRTFLTLADAEAVVAELSQTAAA*