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SCNpilot_expt_1000_bf_scaffold_1900_curated_30

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(24625..25278)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CH11_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 217.0
  • Bit_score: 383
  • Evalue 2.00e-103
  • rbh
Putative HD superfamily hydrolase {ECO:0000313|EMBL:EYR84338.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 217.0
  • Bit_score: 383
  • Evalue 2.80e-103
HD domain-containing protein; K06950 uncharacterized protein similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 215.0
  • Bit_score: 336
  • Evalue 5.10e-90
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGTCCTTCACCTGCCTCGCCGCCGCCTTTTCACCCCTCGGGGACCTTGCAGGCCGCCTGCTGCCGCAGGCCTTTGCCGCCGACGACGGCTCGCATGACGCCGCCCATCTCATCCGCGTGTGGAAGAGCGCCCGGCGCATCCGGGCGGAGGAGGGCGGCGACCTGCGCCTCCTCGCCGCCGCCGTGCTGCTGCACGATTGCGTGGCGGTGGAGAAGAACTCCCCGCTGCGCAAGGAAGCCTCCCGCCTTGCCGCCGAAAAGGCCGCAAGCCTCCTTTCCGCCCAAGGCTGGAGCAAGGCCGATGTGGCGGCCGTCGCAGACGCCATCCTCACGCACAGCTTCTCGGCGAACCTGCCGCCGCAGACGCTGGAGGCGAGGATCCTGCAGGATGCCGACCGGCTGGACGCCATCGGCATGGTCGGCGCGGCGCGCTGCTTCTATATTGCCGGACGCATGGGCAGCGGCCTCTACGATCCGCTGGACCCGCTCGCCGAACGGCGCCCGCTTGACGACAAGGCCTTCGCCATCGACCATTTCGAGGTGAAGCTCTTCCGGCTGGCCGATGGCTTCCAGACGGCGGCAGGCGCGCGGATGGCGAAGGAGCGCACGGAGCGCCTGCGCGCGATCCGCGACATGCTTCTGGATGAAATCTGA
PROTEIN sequence
Length: 218
MSFTCLAAAFSPLGDLAGRLLPQAFAADDGSHDAAHLIRVWKSARRIRAEEGGDLRLLAAAVLLHDCVAVEKNSPLRKEASRLAAEKAASLLSAQGWSKADVAAVADAILTHSFSANLPPQTLEARILQDADRLDAIGMVGAARCFYIAGRMGSGLYDPLDPLAERRPLDDKAFAIDHFEVKLFRLADGFQTAAGARMAKERTERLRAIRDMLLDEI*