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SCNpilot_expt_1000_bf_scaffold_9176_curated_17

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 14110..14544

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator {ECO:0000313|EMBL:EYR79156.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 145.0
  • Bit_score: 227
  • Evalue 1.70e-56
Transcriptional regulator, MarR family protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8AFQ9_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 145.0
  • Bit_score: 181
  • Evalue 5.80e-43
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 145.0
  • Bit_score: 178
  • Evalue 1.20e-42

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATGTCGAACGATTCCCTGATTCCCTACGAGACCACGCTTTTCGTGCGCGACCATTGCCTGTGCCTGCATGCGCAGCGCGCGGCCCGGGCGCTTGCCCGCCGTTTCGACGATGCCCTGCGCCCGCTCGGCCTCACCAACGGCCAGTTCTCGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGTCGCCGCCGTGCTCGCCATGGACCGCACCACGCTGACGGCCGCCCTCAAGCCCCTCGAACGGCGCGGCCTCGTCACCGTGGAGGCCGACCCGCGCGACCGACGCGGCCGCCTGCTGCGCCTGACCCAGGACGGCCGCCGCCTTTTGACCGAGGCCTTCCCGGTCTGGAAGGCGACGCATGACAAGGTCGATGCCCAGCTCTCCGCGATCGACATGAAGGCGCTTCGGGACGGCATGCTG
PROTEIN sequence
Length: 145
MSNDSLIPYETTLFVRDHCLCLHAQRAARALARRFDDALRPLGLTNGQFSLXXXXXXXXXXXXXXVAAVLAMDRTTLTAALKPLERRGLVTVEADPRDRRGRLLRLTQDGRRLLTEAFPVWKATHDKVDAQLSAIDMKALRDGML