ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3591_curated_16

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(15232..16068)

Top 3 Functional Annotations

Value Algorithm Source
Putative allantoin catabolism protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETT6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 278.0
  • Bit_score: 560
  • Evalue 1.20e-156
  • rbh
Putative allantoin catabolism protein {ECO:0000313|EMBL:EYR78696.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 278.0
  • Bit_score: 560
  • Evalue 1.60e-156
putative allantoin catabolism protein similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 278.0
  • Bit_score: 548
  • Evalue 1.10e-153
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 837
ATGCAAAGAAGCTATTACTCCTCCCTCGGCGGCCATCCGCCGCAGAGCGATCTCCTGACCGGCCGCGCCGTCTTCACGGAGGCCTATGCCGTCATTCCCAAGGGTGTGATGCAGGACATAGTCACTTCCTTCCTGCCCTTCTGGAACGAGACGCGCTGCTGGGTGATCGCCCGCCCGCTCTCCGGCTTCGCCGAGACCTTCTCGCAATATGTCATGGAAGTCGCCCCGGGCGGCGGCAGCGACAGGCCGGAGCAGGACCCGGACGCCGAGGGCGTGCTTTTCGTCGTCGACGGCGCGGTGGAGCTGACCCTGCCGACCGGCAGCCACACGCTCAAGCCGGGTGGCTACGCCTTCCTGCCGCCGGGCCTCAAGTGGTCGCTGCACAACCGCTCGGGCGCCCATGCCCGCTTCCACTGGATCCGCAAGGCCTATGAGGCCGTCGACGGCCTGCCCCATCCAGAGCCGCTGATCCTCGACGAAAAGGACATCGCCCCGTCCGTCATGCCCGGCACCGACGGCGGATGGGCAACGACACGCTTCGTCGACCCCTCGGACCTTCGTCACGACATGCATGTGACGATCGTCACGCTCATGCCGGGCGCGGTCATTCCCTTCGCCGAGACCCATGTCATGGAACACGGCCTCTACGTGCTGCAGGGCAAGGCCGTCTATCGCCTCAACCAGGACTGGGTGGAAGTGGAGGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAGGCCTGCTATGCCGGCGGCCCGGAGCCGTTCCGCTACCTGCTCTACAAGGACGTCAACCGCCACATGGCGCTGAAACCCTTCGGCGCACGCCGCTGA
PROTEIN sequence
Length: 279
MQRSYYSSLGGHPPQSDLLTGRAVFTEAYAVIPKGVMQDIVTSFLPFWNETRCWVIARPLSGFAETFSQYVMEVAPGGGSDRPEQDPDAEGVLFVVDGAVELTLPTGSHTLKPGGYAFLPPGLKWSLHNRSGAHARFHWIRKAYEAVDGLPHPEPLILDEKDIAPSVMPGTDGGWATTRFVDPSDLRHDMHVTIVTLMPGAVIPFAETHVMEHGLYVLQGKAVYRLNQDWVEVEAGDFMWLRAFCPQACYAGGPEPFRYLLYKDVNRHMALKPFGARR*