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SCNpilot_expt_1000_bf_scaffold_3591_curated_29

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(23346..23951)

Top 3 Functional Annotations

Value Algorithm Source
Thiamine-phosphate synthase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1P5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 201.0
  • Bit_score: 371
  • Evalue 4.20e-100
  • rbh
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 201.0
  • Bit_score: 371
  • Evalue 5.90e-100
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 201.0
  • Bit_score: 324
  • Evalue 1.90e-86
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGAAGCTCGATCCCTTCTACCTCATCGTCGACAGTTCCGGCTGGATCGAACGCCTCGTGCCCGTCGGCGTCAGGCTGGTACAGCTTCGCATGAAGGACGTGCCGGAAGACCGGCTGCGGAGCGAAATCCGCCGCGCCAGGGCCATCTGCGCCGAGCATGGTTGCCAGCTCGTCGTCAACGATTACTGGCGGATCGCCATCGAGGAGGGCTGCGACTTCGTGCATCTCGGGCAGGAGGACCTGGCCGAGGCCGATGTCGCGGCCATCCGCGCCGCCGGCATGAAGCTGGGCCTTTCCACCCATGACGAAGCCGAGCTTGACAGCGCGCTCGCCGCAAGGCCCGACTACGTGGCACTCGGCCCCGTCTGGCCGACGATCCTGAAAAAGATGAAATGGGCGCCGCAGGGTGTCGAAAGGCTTGCGGACTGGAAGGCGCGCATCGCGCCGCTGCCCCTCGTCGCCATCGGCGGACTCAACCCGGATCGCCTTTCCGCCGTCTTCGAAAACGGCGCCGACAGCGCCGCCGTCGTCACCGACATCACGCTGAACGCCGACCCGCAGGCCCGCACCCGGAAATGGATCGCGCGCACCGCGCGGTGGCGGTGA
PROTEIN sequence
Length: 202
MKLDPFYLIVDSSGWIERLVPVGVRLVQLRMKDVPEDRLRSEIRRARAICAEHGCQLVVNDYWRIAIEEGCDFVHLGQEDLAEADVAAIRAAGMKLGLSTHDEAELDSALAARPDYVALGPVWPTILKKMKWAPQGVERLADWKARIAPLPLVAIGGLNPDRLSAVFENGADSAAVVTDITLNADPQARTRKWIARTARWR*