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SCNpilot_expt_1000_bf_scaffold_6466_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1513..2418

Top 3 Functional Annotations

Value Algorithm Source
5,10-methylenetetrahydrofolate reductase MetF n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BY07_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 301.0
  • Bit_score: 534
  • Evalue 9.60e-149
  • rbh
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 301.0
  • Bit_score: 534
  • Evalue 1.40e-148
metF; 5,10-methylenetetrahydrofolate reductase; K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20] similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 292.0
  • Bit_score: 403
  • Evalue 8.10e-110
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGAAGCCGGCGACCGCCATCCCAGCCCGCAAGGATATCCGTCTGTCCTTCGAATTCTTCCCGCCCAAGACGGCGGAGGCCGAAGGCCAGCTCTGGGAAACGGCCGCCGAGCTCTCGGCCTATGCGCCGCGCTTCATGTCGGTCACCTATGGCGCCGGCGGTTCCACCAAGGCGCCGACGCTGGCGACCGTGCGCCAGCTCCTGAAGATGGGCCTGCCGGCCGCCTCGCACCTGACCTGCGTCGGGGCGACGAGGGAGGAGGTGCATGCCGTCGTCGCGGAATTCCAGGCGGTCGGCGTGAAGCACTTCGTCGCGCTTCGGGGCGACCCGCCGGGCGGCGTCGGCGCGCCCTACCAACCGCATCCGGGCGGCTATGCCAATGCGGCCGAACTGGTCGCGGGCCTGCGCGGGATCGCCGATTTCGAGATTTCCGTTTCCGCATATCCGGAGAAGCATCCGCAAAGTCCCGACGTCGCCGCCGACATCGACATGCTCAAGCGCAAGGTGGATGCGGGCGCGACGCGCGCGCTCACCCAGTTCTTCTTCGAGAACGACGATTTCGAGCGTTACCTCGAGCGCGTGCGCAAGGCCGGCATCGCGATCCCGGTCCTGCCGGGCATCCTGCCGGTGCACAACCTGGCGCAGGTCCGCAAGTTCGCCGGCCTTTGCGGCGCCACCGTGCCCGGCTGGCTGGCGGACCGTCTCGGCCCGATCGACGACCGGCCGCAGGAGCGGGCCGCCGTGGCGGTGGAACTGGCGATCCGCCAGGTGGAGGACCTCATCGCCCGCGGCATCGGCGAGTTCCACTTCTATACGATGAACAGGGCGAGCCTTGTTTCGCAGGTGTGCGACGGCGTCGGCTTTGCGAAGATCGACCGGAGCCGGGCGGCCGGCGCCGCGGCCTGA
PROTEIN sequence
Length: 302
MKPATAIPARKDIRLSFEFFPPKTAEAEGQLWETAAELSAYAPRFMSVTYGAGGSTKAPTLATVRQLLKMGLPAASHLTCVGATREEVHAVVAEFQAVGVKHFVALRGDPPGGVGAPYQPHPGGYANAAELVAGLRGIADFEISVSAYPEKHPQSPDVAADIDMLKRKVDAGATRALTQFFFENDDFERYLERVRKAGIAIPVLPGILPVHNLAQVRKFAGLCGATVPGWLADRLGPIDDRPQERAAVAVELAIRQVEDLIARGIGEFHFYTMNRASLVSQVCDGVGFAKIDRSRAAGAAA*