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SCNpilot_expt_1000_bf_scaffold_10270_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 5829..7619

Top 3 Functional Annotations

Value Algorithm Source
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 597.0
  • Bit_score: 1140
  • Evalue 0.0
Carbamoyl-phosphate synthase large chain n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQT1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 597.0
  • Bit_score: 1140
  • Evalue 0.0
  • rbh
carB; carbamoyl-phosphate synthase large subunit (EC:6.3.5.5) similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 598.0
  • Bit_score: 1091
  • Evalue 0.0
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1791
ATGCCCAAGCGCCAAGATTTGAAATCGATCCTCATCATCGGCGCGGGGCCGATCGTCATCGGTCAGGCCTGCGAATTCGACTATTCCGGAACCCAGGCCTGCAAGGCGCTGAAGGAGGAAGGCTACCGCGTCATCCTCGTCAACTCCAACCCGGCGACGATCATGACCGACCCGGGCCTCGCCGACGCCACCTATGTCGAGCCGATCACCCCCGAGGTCGTGGCAAAAATCATCGCCAAGGAACGCCCGGACGCGCTGCTGCCGACCATGGGCGGCCAGACCGCGCTCAACACCGCGCTCTCTCTCAAGCGCATGGGCGTTCTCGACCGCTACAATGTCGAGATGATCGGCGCCAAGCCCGAGGCCATCGACAAGGCCGAGGACCGCGCCCTCTTCCGCGAGGCCATGGCGAAGATCGGACTCGAAACGCCGAAGTCGATGCTGGCCAACGCCACCGAAATCAAGGACAAGGACCGCAAGCTCCACGAGGCCGAGCGCGCCAAGCTGAAGGCGGAGCTTTCGGGCGACGCGCTCGACAAGGCGCTGGACGAGCTGGAGAACCAGTGGAACCTCGGCGAGACCGACCGCAAGCAGCGCTACATGAGCCACGCCATGGCGATCGGCGCGCAGGCGCTCGACACGATCGGCCTTCCCGCCATCATCCGCCCGTCCTTCACCCTCGGCGGCACCGGCGGCGGCATCGCCTACAACCGCTCGGAATTCTTCGAGATCGTCAATTCCGGCCTCGACGCCTCCCCGACCACGGAAGTGCTCATCGAGGAATCCGTCCTCGGCTGGAAGGAATACGAGATGGAAGTCGTCCGCGACAAGGCGGACAACTGCATCATCATCTGCTCCATCGAGAACATCGACCCGATGGGCGTGCATACGGGTGACTCGATCACCGTCGCCCCGGCCTTGACCCTGACGGACAAGGAATACCAGATCATGCGCAACGCCTCCATCGCGGTGCTGCGCGAGATCGGCGTCGAGACGGGCGGCTCCAACGTGCAGTTCGCCGTCAACCCGGAAAACGGCCGCCTCGTCGTCATCGAGATGAACCCGCGCGTCTCGCGCTCTTCCGCACTGGCATCGAAGGCCACCGGTTTCCCCATCGCCAAGATCGCGGCCAAGCTCGCCATCGGCTACACGCTCGACGAGCTGGAGAACGACATCACCGGCGGCGCGACCCCGGCCTCCTTCGAGCCGTCCATCGACTATGTCGTGACGAAGATCCCGCGCTTCGCCTTCGAGAAGTTCCCCGGCGCCGAGCCGACGCTGACCACCGCCATGAAGTCGGTCGGCGAGGTCATGGCCATCGGCCGCACCTTCGCCGAATCGCTGCAGAAGGCCCTGCGCGGCCTCGAAACGGGCCTGACCGGCCTCGACGAGATCGAGATTCCCGGCCTTGGCGACGGCAACGACAACAATGCCATCCGCGCCGCCATCTCCACCCCGACGCCGGACCGCCTGCGCATGGTCGCCCAGGCGCTGCGCATGGGGCTGACGCCCGAGGAAGTCCACGAGGGTTCCAAGATCGACCCGTGGTTCATCGAGCAGTTCAAGGCCATCGTCGACATGGAGGCCCGCATCCGCGAGCACGGCCTTCCTGATGACGCCGAGAACCTGCGCATGCTGAAGGCCATGGGCTTCTCCGACGCGCGCCTCGCCACCCTCTCCGGCAAGCGCCCGAAGGAAGTGGCGGAACTGCGCAACGGCCTGAATGTCCGCCCGGTCTTCAAGCGCATCGACACCTGCGCCGCCGAATTCGCCTCGCCCACCGCCTACATG
PROTEIN sequence
Length: 597
MPKRQDLKSILIIGAGPIVIGQACEFDYSGTQACKALKEEGYRVILVNSNPATIMTDPGLADATYVEPITPEVVAKIIAKERPDALLPTMGGQTALNTALSLKRMGVLDRYNVEMIGAKPEAIDKAEDRALFREAMAKIGLETPKSMLANATEIKDKDRKLHEAERAKLKAELSGDALDKALDELENQWNLGETDRKQRYMSHAMAIGAQALDTIGLPAIIRPSFTLGGTGGGIAYNRSEFFEIVNSGLDASPTTEVLIEESVLGWKEYEMEVVRDKADNCIIICSIENIDPMGVHTGDSITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPENGRLVVIEMNPRVSRSSALASKATGFPIAKIAAKLAIGYTLDELENDITGGATPASFEPSIDYVVTKIPRFAFEKFPGAEPTLTTAMKSVGEVMAIGRTFAESLQKALRGLETGLTGLDEIEIPGLGDGNDNNAIRAAISTPTPDRLRMVAQALRMGLTPEEVHEGSKIDPWFIEQFKAIVDMEARIREHGLPDDAENLRMLKAMGFSDARLATLSGKRPKEVAELRNGLNVRPVFKRIDTCAAEFASPTAYM