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SCNpilot_expt_1000_bf_scaffold_10270_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10270_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..573
DNA (573bp) protein (191aa)
Putative oxidoreductase, aldo/keto reductase family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C878_9RHIZ rbh
Putative oxidoreductase, aldo/keto reductase family {ECO:0000313|EMBL:EYR79067.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative oxidoreductase, aldo/keto reductase family rbh
SCNpilot_expt_1000_bf_scaffold_10270_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(633..1070)
DNA (438bp) protein (146aa)
Putative zinc protease protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTI7_9RHIZ
Putative zinc protease protein {ECO:0000313|EMBL:EYR79065.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
zinc protease protein; K07054
SCNpilot_expt_1000_bf_scaffold_10270_curated_3
unknown

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1199..1345
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10270_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2370..3077
DNA (708bp) protein (236aa)
Response regulator of the LytR/AlgR family n=2 Tax=cellular organisms RepID=V5EST0_9RHIZ rbh
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:EYR79063.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10270_curated_5
unknown

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comp(3377..3721)
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10270_curated_6
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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4243..4800
DNA (558bp) protein (186aa)
Uncharacterized protein {ECO:0000313|EMBL:KIY13974.1}; Flags: Fragment;; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
SCNpilot_expt_1000_bf_scaffold_10270_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4812..5618
DNA (807bp) protein (269aa)
Beta-lactamase OXA-9 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVC7_9RHIZ rbh
Beta-lactamase OXA-9 {ECO:0000313|EMBL:EYR79059.1}; EC=3.5.2.6 {ECO:0000313|EMBL:EYR79059.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
beta-lactamase class D; K01467 beta-lactamase [EC:3.5.2.6] rbh
SCNpilot_expt_1000_bf_scaffold_10270_curated_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5829..7619
DNA (1791bp) protein (597aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQT1_9RHIZ rbh
carB; carbamoyl-phosphate synthase large subunit (EC:6.3.5.5) rbh
Displaying 8 items

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