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SCNpilot_expt_1000_bf_scaffold_4996_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(2816..3076)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CEB701 related cluster n=1 Tax=unknown RepID=UPI0003CEB701 similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 81.0
  • Bit_score: 87
  • Evalue 5.30e-15
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESY64001.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 81.0
  • Bit_score: 87
  • Evalue 7.40e-15
sugar ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 78.0
  • Bit_score: 84
  • Evalue 1.40e-14

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Taxonomy

Mesorhizobium sp. LNHC252B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
GTGCTGCTGGACGAGCCGACGGCGGCGCTTGGCGTGCAGGAAACCGCCAAGGCCATGGAGGCCGTGCGCCAGTTGCAGAAGAACGGCGTCGCCATCATCCTCATCACCCACAGCATGCCGATGGCAAAGGAAATGAGCGACCGGGTGATCGTCCTGCGTCGCGGGAAGAAGGTTGGCGACGTGCGCACCGCGGCGGTGTCGGGCGACGACATCGTATCCCTGATCACCGGCGCCCGCGACCACCATATCGAGGCTGCCTGA
PROTEIN sequence
Length: 87
VLLDEPTAALGVQETAKAMEAVRQLQKNGVAIILITHSMPMAKEMSDRVIVLRRGKKVGDVRTAAVSGDDIVSLITGARDHHIEAA*