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SCNpilot_expt_1000_bf_scaffold_4996_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4996_curated_1
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..248)
DNA (246bp) protein (82aa)
Acyl-CoA synthetase {ECO:0000313|EMBL:EZQ19530.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3HK20_PSEAC
SCNpilot_expt_1000_bf_scaffold_4996_curated_2
Sodalis praecaptivus, Sodalis, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(288..1103)
DNA (816bp) protein (272aa)
Putative coenzyme A transferase {ECO:0000313|EMBL:AHF77275.1}; TaxID=1239307 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Sodalis.;" source="Sodalis praecaptivus.;"
coenzyme A transferase; K01039 glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
Coenzyme A transferase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SC62_NOCSJ
SCNpilot_expt_1000_bf_scaffold_4996_curated_3
R_NC10_66_22, NC10, Bacteria

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comp(1100..1879)
DNA (780bp) protein (260aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit
Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1Z1_DESTA
SCNpilot_expt_1000_bf_scaffold_4996_curated_4
R_NC10_66_22, NC10, Bacteria

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comp(1876..2811)
DNA (936bp) protein (312aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
catI; 3-oxoadipate:succinyl-CoA transferase subunit A (EC:2.8.3.6); K01039 glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
3-oxoadipate:succinyl-CoA transferase, A subunit n=2 Tax=Saccharopolyspora erythraea RepID=A4FGV4_SACEN
SCNpilot_expt_1000_bf_scaffold_4996_curated_5
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2816..3076)
DNA (261bp) protein (87aa)
UPI0003CEB701 related cluster n=1 Tax=unknown RepID=UPI0003CEB701
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESY64001.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
sugar ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
SCNpilot_expt_1000_bf_scaffold_4996_curated_6
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3125..3580)
DNA (456bp) protein (152aa)
Sugar (Ribose) ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFC64558.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
sugar ABC transporter n=1 Tax=Rhizobium loti RepID=UPI000369BD4B
ABC transporter; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
SCNpilot_expt_1000_bf_scaffold_4996_curated_7
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3808..4851
DNA (1044bp) protein (348aa)
Uncharacterized protein {ECO:0000313|EMBL:EWY41826.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
transcriptional regulator; K02529 LacI family transcriptional regulator
Transcriptional regulator n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YAE4_DICT6
SCNpilot_expt_1000_bf_scaffold_4996_curated_8
Lysinibacillus massiliensis, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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5002..5730
DNA (729bp) protein (243aa)
Uncharacterized protein {ECO:0000313|EMBL:KGR89466.1}; TaxID=1211035 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529.;"
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JLP5_9CLOT
periplasmic binding protein/LacI transcriptional regulator
Displaying 8 items

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