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SCNpilot_expt_1000_bf_scaffold_4996_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 5002..5730

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:KGR89466.1}; TaxID=1211035 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 27.9
  • Coverage: 229.0
  • Bit_score: 125
  • Evalue 8.90e-26
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JLP5_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 28.5
  • Coverage: 235.0
  • Bit_score: 101
  • Evalue 1.30e-18
periplasmic binding protein/LacI transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 30.3
  • Coverage: 254.0
  • Bit_score: 98
  • Evalue 2.60e-18

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Taxonomy

Lysinibacillus massiliensis → Lysinibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 729
ATGAAGAAATTCGTTGCTGGATTGCTGGCGGCTGCGGCCGTGATGACGGCCGGTCAGTCCCAGGCCGCAGATGTGATCGGCGCCGTGGTCTATGCCCGCGACTCGCAGTATTGGCAGCAGGTCGAGCGCGGCATGAGCGATGCTGCGGAGAAATACGGGGTGACCCTGCAGGTCGGCCAGAACCGCCGCCAGCTGCCGACCGAGGCTCAGGTCATCGAGGACTTCGTCACCCGCGGCGTCAAGGCGATTGTCATGCCCCCGCTTGATGTCAACGCATCTGCTGCGGCTGCCAGGCGCGCCGCCGATCGCGGTATCGTTATCGTCGATTTCGACACCGCGCTCGCCGACAAGTCTATCGCCAAGCACACGATCGGCGTCGACGGCTTCAAAATGGCCGCCGAGCTCGGAACGGTGATGACGGAGCAGCTCTCGAAGCTCAACGGCGGCAAGAATACCGTCAGCCTGATCACCTTGCCGCCCACCAACCCCAACATGCTGCCGCGCAAGAACGGTCTGCTTTCGACGCTAAAGGGCGAGGGAATCACGATCGGCAGCGAAGTCGCTGCGGCCACCCCGGAACTCGGCGCCAACGCCTACGAGAACATCCTGCAGCGCGACCCGGAGACGGCGGCGATCTGGGCCTCGAATTCCGGCTCCCTGTCGGGCGCTGCCCAGGCCGCGCGGCGCAAGTCGGCCGAGGTCCGGCTCTATGGCGTCGACATGAGCTAG
PROTEIN sequence
Length: 243
MKKFVAGLLAAAAVMTAGQSQAADVIGAVVYARDSQYWQQVERGMSDAAEKYGVTLQVGQNRRQLPTEAQVIEDFVTRGVKAIVMPPLDVNASAAAARRAADRGIVIVDFDTALADKSIAKHTIGVDGFKMAAELGTVMTEQLSKLNGGKNTVSLITLPPTNPNMLPRKNGLLSTLKGEGITIGSEVAAATPELGANAYENILQRDPETAAIWASNSGSLSGAAQAARRKSAEVRLYGVDMS*