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SCNpilot_expt_1000_bf_scaffold_4631_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 5059..6528

Top 3 Functional Annotations

Value Algorithm Source
Sensor protein FixL n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQD1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 474.0
  • Bit_score: 742
  • Evalue 2.20e-211
  • rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 474.0
  • Bit_score: 742
  • Evalue 3.10e-211
sensor histidine kinase protein (EC:2.7.13.3) similarity KEGG
DB: KEGG
  • Identity: 31.1
  • Coverage: 543.0
  • Bit_score: 186
  • Evalue 2.50e-44

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1470
GTGACGCGGCAATGGTCCTGGCGGAAGGCGAATGTCGCGGCGGGCCTCTGGTGCATCGCCGTTGGCCTTGCCATGGTGGCGCTCTGGCTGGCCGAGCCGGCCGGCCTGGCCGCGCGCCATCCTTTCCTGTTCGGCATGAAGTTCAACGCGGCGCTCGCCTTCGTCGTCGTCGGCGCGGCGCTGCTTCTTGCCACGCGCGGCCTGCGGCGGCTGCCGGCGCTCATGCTGCTGCCGGTCTTCCTCTATGGCGCGCTCGCCCTTTCGCAGCACCTCTTCGGCATAGACGCCGGCATCGACACGCTGCTCGACCGGCCTTTCGTCGATATAGGCACCAGCCGCCCGGGCCGCATCGCGCCCAACACGGCGCTCTGTTTCATGCTGGTGAGCCTGGCGCTGTTTCTGCGCGCGGTGCGGCAGAGGGGCGACATCGCGCAGGTGGCGCTCGGCTTTACCACCTTCATCGTCGCGGCGGCGGCCCTCGTCGGCTATGCGATCGGGCTCGAATTCGCGCATGACTGGGTCCGCTTCACCCGCATGTCCTTCCAGAGCGCGAGCTGTTTTGCGGCGCTCGGCCTCGTGCTCGTCTTCGCCGGGCCGCAGGCGACCGGCTACTACCGGCTGACCCTTGCCGGCGTGCTCGGCCTTGCCACCTACCTCCTGCTGCTCGCCATGACCTACTACGAACTGGCGCGCTACGAATCGGCCTTCGGCATCACCTTCTCCGGGAGCGGCGGCGGCACGCGCTCGACGCTTTCCTCTCTGGTGCTGATTTCCGGCGCGCTCTACGGCGCGCTGATCGCCCATCTCTACGTCTCATCCCGCCGCGCCCGCCGCATGGCGTTGGACCTTGCCGAAAGCCGGGCGCGCCTTGCCGCCATCATCGACAATGCGGTGGACGGCATCGTCACCATCGACGAGCGCGGCATCGTGCTCACCGTCAACGCGGCCTGCACGCGCATCTTCGGCTATGCGGACGGGGAGATGATCGGCCGCAACGTGAAGATGCTGATGCCGGAGCCCTACCACGGCGAGCACGACCGCTATCTCTCCAGCTACCGCCGCACCGGCGAGGCGAAGATCATCGGCATCGGCCGCGAGGTGGAGGGCCGGCGCAAGGACGGCACGACCTTCCCGCTCGAACTCGCCGTCGCCCGGCTCGACGTCAACGGCGGCACGATCTACAGCGGCATCGTGCGCGACATTTCCGGGCGCAAGGCGAGCGAGCAGGCGCTGATCGAGACCAATGCCGAACTGGAGGAATTCGCCTACCGCACCTCGCACGACCTGCGCTCGCCGATCGCCTCCTCGCTCGGCCTGCTCGGCATCTCGCGCGACATGCTGGCGGAGGGCGACCTTGCCGGGCTCGGCCAGATGCTCCAGCGCATGGAGCGGAACTTCCGCCGCCTCGCCCACCTGATTCAGAANNNNNNNNNNNNNNNNNCATCCTCACCGTCACGCGCAACCGGCTGA
PROTEIN sequence
Length: 490
VTRQWSWRKANVAAGLWCIAVGLAMVALWLAEPAGLAARHPFLFGMKFNAALAFVVVGAALLLATRGLRRLPALMLLPVFLYGALALSQHLFGIDAGIDTLLDRPFVDIGTSRPGRIAPNTALCFMLVSLALFLRAVRQRGDIAQVALGFTTFIVAAAALVGYAIGLEFAHDWVRFTRMSFQSASCFAALGLVLVFAGPQATGYYRLTLAGVLGLATYLLLLAMTYYELARYESAFGITFSGSGGGTRSTLSSLVLISGALYGALIAHLYVSSRRARRMALDLAESRARLAAIIDNAVDGIVTIDERGIVLTVNAACTRIFGYADGEMIGRNVKMLMPEPYHGEHDRYLSSYRRTGEAKIIGIGREVEGRRKDGTTFPLELAVARLDVNGGTIYSGIVRDISGRKASEQALIETNAELEEFAYRTSHDLRSPIASSLGLLGISRDMLAEGDLAGLGQMLQRMERNFRRLAHLIQXXXXXXXSSPSRATG*