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SCNpilot_expt_1000_bf_scaffold_4631_curated_13

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 10548..10925

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDS9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 125.0
  • Bit_score: 214
  • Evalue 5.40e-53
Uncharacterized protein {ECO:0000313|EMBL:EYR80795.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 125.0
  • Bit_score: 214
  • Evalue 7.60e-53
transcriptional regulator, XRE family similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 115.0
  • Bit_score: 166
  • Evalue 6.90e-39

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGCAGCGCAAACCCGTCCCGCAAGCCGATGCCGAAGGCGTCGTGCTCACCAAGGCAGCCGTCCGGGCGGCGGAGCGGCTGGGGCTGACGGCCCGCATCCTGTCGGCGGTCATCGGCGTTTCGGAAGCGACGGTCTCGCGGCTGAAGCGGCAGGACGTGCTCTTGGAGCGCGGCACCAAGCCCTTCGAGCTTGCCGTGCTGCTCGTGCGCCTTTTCCGCTCGCTCGATGCCATCACCGGCGGCGACGAGGGTGTCGCCCGCGCCTGGATGACGGCGCAGAACACCGCGCTTCGCGCCCGTCCCGTCGACCGAATCGTTTCCGTTTCCGGCCTTGTCGATGTCCTTGCCTATCTGGACGCCCGCCGCGCTCTCGTCTGA
PROTEIN sequence
Length: 126
MQRKPVPQADAEGVVLTKAAVRAAERLGLTARILSAVIGVSEATVSRLKRQDVLLERGTKPFELAVLLVRLFRSLDAITGGDEGVARAWMTAQNTALRARPVDRIVSVSGLVDVLAYLDARRALV*