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SCNpilot_expt_1000_bf_scaffold_8806_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 2974..3336

Top 3 Functional Annotations

Value Algorithm Source
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0C2L8_RHILT similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 115.0
  • Bit_score: 127
  • Evalue 1.10e-26
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:EJC77072.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.9
  • Coverage: 115.0
  • Bit_score: 127
  • Evalue 1.50e-26
response regulator protein similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 119.0
  • Bit_score: 125
  • Evalue 1.00e-26

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 363
ATGAAGCATAAAATGACCGTCCTCGTCGTCGAGGACGAGCCGATCGTGCGGTTCGATGCCGTCGACATGCTCGAGGCGGCGGGCATGGAGGCGCTGGAGGCGGCCAATGCCGCCGAGGCGATGACCATGCTGAAGCTGCGCCCCGATGTCTCGGTGCTCTTCACCGACGTCAACATGGAGGGCAACGTGGACGGGCTCGACCTTGCAAGAACCGTCGCGGCGAACTGGCCGCACATCCGCATCGTGGTCACGTCAGGGCATGTGCGCCTGCGCGACGCGGATTTGCCGGCCGCGTCCTCCTTCCTTCCCAAGCCCTACCTGCGCGAAAGCCTCGTCGCCGTGCTCGGCGCGCGGGCCGCGTGA
PROTEIN sequence
Length: 121
MKHKMTVLVVEDEPIVRFDAVDMLEAAGMEALEAANAAEAMTMLKLRPDVSVLFTDVNMEGNVDGLDLARTVAANWPHIRIVVTSGHVRLRDADLPAASSFLPKPYLRESLVAVLGARAA*