name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_8806_curated_1
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
141..440
|
hypothetical protein
Uncharacterized protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KRM0_RHISN
Uncharacterized protein {ECO:0000313|EMBL:ACP22728.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
|
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SCNpilot_expt_1000_bf_scaffold_8806_curated_2
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(719..1246)
|
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma factor n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KLN6_RHISN
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
|
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SCNpilot_expt_1000_bf_scaffold_8806_curated_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1280..1906)
|
Nicotinamidase-like amidase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9XBX8_RHILT
Nicotinamidase-like amidase {ECO:0000313|EMBL:EJB06536.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
isochorismatase hydrolase
|
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SCNpilot_expt_1000_bf_scaffold_8806_curated_4
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2699..2896
|
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI0003659598
Uncharacterized protein {ECO:0000313|EMBL:CDM60828.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_8806_curated_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2974..3336
|
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0C2L8_RHILT
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:EJC77072.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
response regulator protein
|
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SCNpilot_expt_1000_bf_scaffold_8806_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3394..3936
|
Putative 3-methyladenine DNA glycosylase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXR6_9RHIZ
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
DNA-3-methyladenine glycosylase; K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21]
|
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SCNpilot_expt_1000_bf_scaffold_8806_curated_7
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4015..4515
|
Stress response protein YciF 2 {ECO:0000313|EMBL:AJD42619.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
hypothetical protein
Hypothetical conserved protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q4J0_RHIE6
|
|
SCNpilot_expt_1000_bf_scaffold_8806_curated_8
unknown
|
Not on your lists |
4720..4956
|
Uncharacterized protein n=1 Tax=Pseudomonas sp. CMAA1215 RepID=U6ZS73_9PSED
|
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SCNpilot_expt_1000_bf_scaffold_8806_curated_9
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5246..6496
|
Glycogen synthase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QEK0_9RHIZ
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
glgA; glycogen synthase; K00703 starch synthase [EC:2.4.1.21]
|
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SCNpilot_expt_1000_bf_scaffold_8806_curated_10
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6490..7128
|
Phage SPO1 DNA polymerase-related protein n=1 Tax=Rhizobium sp. RepID=L0NIC0_RHISP
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:CCF20619.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
phage SPO1 DNA polymerase-related protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7]
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SCNpilot_expt_1000_bf_scaffold_8806_curated_11
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7115..7387)
|
hypothetical protein
Hypothetical conserved protein n=2 Tax=Rhizobium etli RepID=B3PUX3_RHIE6
Uncharacterized protein {ECO:0000313|EMBL:KEC73996.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
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SCNpilot_expt_1000_bf_scaffold_8806_curated_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7509..7802
|
Putative periplasmic or secreted lipoprotein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CU36_9RHIZ
Putative periplasmic or secreted lipoprotein {ECO:0000313|EMBL:EYR78013.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
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SCNpilot_expt_1000_bf_scaffold_8806_curated_13
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7895..8266
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D6B7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR78016.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_8806_curated_14
unknown
|
Not on your lists |
comp(8717..8875)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_8806_curated_15
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9032..9244
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDQ3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR77825.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative transmembrane protein
|
|
SCNpilot_expt_1000_bf_scaffold_8806_curated_16
unknown
|
Not on your lists |
comp(9241..9888)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_8806_curated_17
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9890..11788
|
Mechanosensitive ion channel MscS n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EV79_9RHIZ
rbh
Mechanosensitive ion channel MscS {ECO:0000313|EMBL:EYR77824.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
potassium efflux system KEFA
rbh
|
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SCNpilot_expt_1000_bf_scaffold_8806_curated_18
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11935..12198
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY17_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR77823.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_8806_curated_19
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12388..13215
|
Response regulator {ECO:0000313|EMBL:EYR77822.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=J0C1C7_RHILT
rbh
response regulator receiver protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_8806_curated_20
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13710..13934
|
Diguanylate cyclase {ECO:0000313|EMBL:EYR77821.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
pleD4; response regulator PleD (EC:2.7.7.65)
Response regulator PleD n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XAA4_RHIFR
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