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SCNpilot_expt_1000_bf_scaffold_8806_curated_20

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 13710..13934

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase {ECO:0000313|EMBL:EYR77821.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 75.0
  • Bit_score: 122
  • Evalue 3.00e-25
pleD4; response regulator PleD (EC:2.7.7.65) similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 74.0
  • Bit_score: 62
  • Evalue 8.40e-08
Response regulator PleD n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XAA4_RHIFR similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 74.0
  • Bit_score: 62
  • Evalue 2.70e-07

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 225
ATGCAGCAGCTCGTGCTGGCCGTCGACCGCATCCTGACGAGCGGCAAGACGCAGGTGCTGGTCGTCGATTCGGACCCGGAAAGCCTCCAGCAGCAACTGGGCCTGATCGCCAAGCAGCGCTTCCAGATCGTCGCCGTAGAAAACGGCACCGCGGCGCTGGAAGTCCTGGATTCCCATGGCGGGATCGACATGGTGGTGACGGACCTCGATCTTGCCGACATGGAC
PROTEIN sequence
Length: 75
MQQLVLAVDRILTSGKTQVLVVDSDPESLQQQLGLIAKQRFQIVAVENGTAALEVLDSHGGIDMVVTDLDLADMD