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SCNpilot_expt_1000_bf_scaffold_8273_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 4337..5461

Top 3 Functional Annotations

Value Algorithm Source
Putative GTPase {ECO:0000313|EMBL:EYR80551.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 372.0
  • Bit_score: 715
  • Evalue 4.10e-203
cobalamin synthesis protein P47K similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 372.0
  • Bit_score: 665
  • Evalue 1.40e-188
  • rbh
Cobalamin synthesis protein P47K n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UD67_SINMW similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 372.0
  • Bit_score: 665
  • Evalue 4.50e-188
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
ATGACCGAAACAGCCCTTCCCAAGCCCATTCCCGTCACCGTGCTCACCGGTTATCTCGGCGCCGGCAAGACGACGCTGCTGAACCGCATCCTCACCGACAACCACGGCAAGAAATATGCCGTCATCGTCAACGAGTTCGGCGAGATCGGCATCGACAACGACCTGATCGTCGAGTCGGACGAGGAAATCTACGAAATGAACAACGGCTGCATCTGCTGCACCGTGCGCGGCGACCTGATCCGCGTGGTGGAAGGCCTGATGCGCCGCCCCGGCCGCTTCGATGCCATCATCGTCGAGACCACCGGCCTTGCCGATCCCGTGCCGGTCGCCCAGACCTTCTTCATGGACGACGACGTGCGCCAGAAGACCGAGCTCGACGCCGTGGTCGCCCTCGTCGACGCCAAGCACCTGCCGCTGCGCCTGAAGGACAGCCGCGAGGCCGAGGACCAGATCGCCTTTGCCGACGTCGTGCTGATCAACAAGACCGACCTCGTGAGCCCCGAAGAACTCGCCCGGGTCGAGGCCACGGTGCGCGCCATCAACCCGTCCGCCCGCATCCACCGCACGACCCGCTCGGAGATCGACCTCACCAAGGTTCTCGACCAGGGTGCGTTCAACCTGGAACGCGCGCTGGAGAACGATCCGCATTTCCTCGACCACGATCACCCGGACCATGTCTGCGGCCCCGATTGCGGCCATGACCATCATCACCATGATCACGACCACGATCACCACCATCATGATCATGATCACGACCATCACCACCACGATCATGACCATGGCCACCATCACCACGACCACGGCGTCTCGCCGATCCATGACGTGACGGTGCAGTCGATCTCGCTGCGCGGCGGCGAGATGAACCCCGAGCGCTTCTTCCCCTGGATCCAGAAGATCACACAGACGGACGGCCCGAACATCCTGCGCCTCAAGGGCATCATCGCCTTTGCCGGCGATGACGAGCGCTATGTCGTGCAGGGCGTGCACATGATCGTCGAGGGCGACCACCAGCGCGCCTGGAAGGATGGCGAGACGCGCGAAAGCCGCCTCGTCTTCATCGGCCGCGATCTCGACCGCGAGAAGATCGAGCGCACGTTCAAGGCCTGCGAGGTGCAGAAAGCATGA
PROTEIN sequence
Length: 375
MTETALPKPIPVTVLTGYLGAGKTTLLNRILTDNHGKKYAVIVNEFGEIGIDNDLIVESDEEIYEMNNGCICCTVRGDLIRVVEGLMRRPGRFDAIIVETTGLADPVPVAQTFFMDDDVRQKTELDAVVALVDAKHLPLRLKDSREAEDQIAFADVVLINKTDLVSPEELARVEATVRAINPSARIHRTTRSEIDLTKVLDQGAFNLERALENDPHFLDHDHPDHVCGPDCGHDHHHHDHDHDHHHHDHDHDHHHHDHDHGHHHHDHGVSPIHDVTVQSISLRGGEMNPERFFPWIQKITQTDGPNILRLKGIIAFAGDDERYVVQGVHMIVEGDHQRAWKDGETRESRLVFIGRDLDREKIERTFKACEVQKA*