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SCNpilot_BF_INOC_scaffold_1637_curated

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1637_curated_1
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(284..1180)
DNA (897bp) protein (299aa)
Transcriptional attenuator, LytR family n=1 Tax=Cyanobacterium stanieri (strain ATCC 29140 / PCC 7202) RepID=K9YI29_CYASC
transcriptional attenuator, LytR family
Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
SCNpilot_BF_INOC_scaffold_1637_curated_2
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1196..2383)
DNA (1188bp) protein (396aa)
fprA2; Flavo-diiron protein FprA2 (EC:1.6.3.-) rbh
metallo-beta-lactamase n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037020DE rbh
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EJF38724.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
SCNpilot_BF_INOC_scaffold_1637_curated_3
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2447..2605)
DNA (159bp) protein (53aa)
Rubredoxin n=7 Tax=Clostridium thermocellum RepID=A3DHD7_CLOTH
rubredoxin-type Fe(Cys)4 protein
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
SCNpilot_BF_INOC_scaffold_1637_curated_4
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3169..4515
DNA (1347bp) protein (449aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205) rbh
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U7C8_ETHHY rbh
SCNpilot_BF_INOC_scaffold_1637_curated_5
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4671..5630)
DNA (960bp) protein (320aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1) rbh
Ribose-phosphate pyrophosphokinase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PG17_9FIRM rbh
SCNpilot_BF_INOC_scaffold_1637_curated_6
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5644..6381)
DNA (738bp) protein (246aa)
N-acetylglucosamine-1-phosphate uridyltransferase (Contains nucleotidyltransferase and I-patch acetyltransferase domains) n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E3B5_9FIRM
N-acetylglucosamine-1-phosphate uridyltransferase (Contains nucleotidyltransferase and I-patch acetyltransferase domains) {ECO:0000313|EMBL:CCX82661.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)
SCNpilot_BF_INOC_scaffold_1637_curated_7
unknown

Not on your lists

6553..6768
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1637_curated_8
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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8453..9616
DNA (1164bp) protein (388aa)
pyruvate, phosphate dikinase (EC:2.7.9.1) rbh
Pyruvate phosphate dikinase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y818_9FIRM rbh
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CDD30055.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
SCNpilot_BF_INOC_scaffold_1637_curated_9
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9868..10170
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KRM7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67724.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
SCNpilot_BF_INOC_scaffold_1637_curated_10
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10170..10361
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RVZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38562.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1637_curated_11
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10468..10713)
DNA (246bp) protein (82aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
RNA-splicing ligase RtcB n=1 Tax=Eubacterium sp. CAG:115 RepID=R5L9R8_9FIRM
hypothetical protein
SCNpilot_BF_INOC_scaffold_1637_curated_12
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10710..11690)
DNA (981bp) protein (327aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
RNA-splicing ligase RtcB n=1 Tax=Eubacterium sp. CAG:115 RepID=R5L9R8_9FIRM rbh
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_1637_curated_13
Bacillus nealsonii, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11723..12124)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Bacillus nealsonii AAU1 RepID=R9C5P6_9BACI
Uncharacterized protein {ECO:0000313|EMBL:EOR24608.1}; TaxID=1202533 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus nealsonii AAU1.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1637_curated_14
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12139..13245)
DNA (1107bp) protein (369aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNF9_9FIRM rbh
Peptidase {ECO:0000313|EMBL:KJF41014.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
stomatin family protein rbh
SCNpilot_BF_INOC_scaffold_1637_curated_15
unknown

Not on your lists

comp(13282..13746)
DNA (465bp) protein (155aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1637_curated_16
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13743..14627)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:115 RepID=R5LM13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY74146.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1637_curated_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14627..15862)
DNA (1236bp) protein (412aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJ29_9FIRM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CBL33762.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
SCNpilot_BF_INOC_scaffold_1637_curated_18
Mucispirillum schaedleri, Mucispirillum, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(16012..17205)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Mucispirillum schaedleri ASF457 RepID=V2Q9H1_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:ESJ97165.1}; TaxID=1379858 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Mucispirillum.;" source="Mucispirillum schaedleri ASF457.;"
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_1637_curated_19
Mucispirillum schaedleri, Mucispirillum, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(17195..19054)
DNA (1860bp) protein (620aa)
Uncharacterized protein n=1 Tax=Mucispirillum schaedleri ASF457 RepID=V2QD43_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:ESJ97164.1}; TaxID=1379858 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Mucispirillum.;" source="Mucispirillum schaedleri ASF457.;"
DNA adenine methylase rbh
SCNpilot_BF_INOC_scaffold_1637_curated_20
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19326..20627)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KRI1_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCY67679.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_1637_curated_21
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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comp(21713..22153)
DNA (441bp) protein (147aa)
Uncharacterized protein id=4235512 bin=GWF2_Clostridiales_38_85 species=Pseudoflavonifractor capillosus genus=Pseudoflavonifractor taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Tax=GWF2_Clostridiales_38_85_curated
SCNpilot_BF_INOC_scaffold_1637_curated_22
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(22552..22740)
DNA (189bp) protein (63aa)
hypothetical protein RflaF_09992 id=4235514 bin=GWF2_Clostridiales_38_85 species=Ruminococcus flavefaciens genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Tax=GWF2_Clostridiales_38_85_curated
SCNpilot_BF_INOC_scaffold_1637_curated_23
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(22737..24692)
DNA (1956bp) protein (652aa)
hypothetical protein RflaF_09992 id=4235514 bin=GWF2_Clostridiales_38_85 species=Ruminococcus flavefaciens genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212 rbh
Tax=GWF2_Clostridiales_38_85_curated
SCNpilot_BF_INOC_scaffold_1637_curated_24
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(25132..25515)
DNA (384bp) protein (128aa)
hypothetical protein RflaF_09992 id=4235514 bin=GWF2_Clostridiales_38_85 species=Ruminococcus flavefaciens genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Tax=GWF2_Clostridiales_38_85_curated
SCNpilot_BF_INOC_scaffold_1637_curated_25
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

25636..25920
DNA (285bp) protein (95aa)
Putative uncharacterized protein id=4235642 bin=GWF2_Clostridiales_38_85 species=Eubacterium siraeum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein
Tax=GWF2_Clostridiales_38_85_curated
SCNpilot_BF_INOC_scaffold_1637_curated_26
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

26016..26792
DNA (777bp) protein (259aa)
Uncharacterized protein id=4235644 bin=GWF2_Clostridiales_38_85 species=Eubacterium siraeum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212 rbh
plasmid segregation actin-type ATPase ParM rbh
Tax=GWF2_Clostridiales_38_85_curated
SCNpilot_BF_INOC_scaffold_1637_curated_27
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

26810..27085
DNA (276bp) protein (92aa)
Uncharacterized protein id=4235646 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Tax=GWF2_Clostridiales_38_85_curated
SCNpilot_BF_INOC_scaffold_1637_curated_28
unknown

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27066..27392
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1637_curated_29
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27382..27645
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L328_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67716.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
SCNpilot_BF_INOC_scaffold_1637_curated_30
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27647..28105
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0J958_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT28807.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
Displaying items 1-30 of 53 in total

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