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SCNpilot_BF_INOC_scaffold_1368_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1368_curated_1
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..437
DNA (435bp) protein (145aa)
SsrA-binding protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AMY7_9CLOT
smpB; SsrA-binding protein
Tax=BJP_IG2157_Clostridiales_52_13
SCNpilot_BF_INOC_scaffold_1368_curated_2
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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434..1684
DNA (1251bp) protein (417aa)
Diaminopimelate decarboxylase n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AH53_9CLOT rbh
Orn/DAP/Arg decarboxylase 2 rbh
Tax=BJP_IG2157_Clostridiales_52_13
SCNpilot_BF_INOC_scaffold_1368_curated_3
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1816..3069
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJ99_9FIRM
Tax=BJP_IG2157_Clostridiales_52_13
SCNpilot_BF_INOC_scaffold_1368_curated_4
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(3344..3784)
DNA (441bp) protein (147aa)
Site-specific recombinases DNA invertase Pin homologs n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQE0_9FIRM
Site-specific recombinases DNA invertase Pin homologs {ECO:0000313|EMBL:CCY27007.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1368_curated_5
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(3735..4493)
DNA (759bp) protein (253aa)
Site-specific recombinases DNA invertase Pin homologs n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQE0_9FIRM
Site-specific recombinases DNA invertase Pin homologs {ECO:0000313|EMBL:CCY27007.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Site-specific recombinases, DNA invertase Pin homologs
SCNpilot_BF_INOC_scaffold_1368_curated_6
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4843..5565)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MXV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS75879.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
XRE family transcriptional regulator
SCNpilot_BF_INOC_scaffold_1368_curated_7
unknown

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5690..5821
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1368_curated_8
unknown

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5825..5944
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1368_curated_9
unknown

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6145..7137
DNA (993bp) protein (331aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1368_curated_10
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7497..7838
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Stomatobaculum longum RepID=H1HSC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO17616.1}; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
SCNpilot_BF_INOC_scaffold_1368_curated_11

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comp(8014..8196)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1SQE2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC56050.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
SCNpilot_BF_INOC_scaffold_1368_curated_12
unknown

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8343..8987
DNA (645bp) protein (215aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1368_curated_13
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9097..9417
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZRT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87529.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
SCNpilot_BF_INOC_scaffold_1368_curated_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9695..11176
DNA (1482bp) protein (494aa)
Eco57I restriction endonuclease family protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B7Y8_9FIRM rbh
Eco57I restriction endonuclease {ECO:0000313|EMBL:EEV02852.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Predicted O-methyltransferase rbh
SCNpilot_BF_INOC_scaffold_1368_curated_15
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11163..12101
DNA (939bp) protein (313aa)
Type II restriction enzyme PstI {ECO:0000313|EMBL:EGY80386.1}; EC=3.1.21.4 {ECO:0000313|EMBL:EGY80386.1};; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus ATCC 29427.;"
Type II restriction endonuclease BsuBI n=1 Tax=Streptococcus agalactiae GB00679 RepID=S8WWI0_STRAG rbh
type II restriction enzyme rbh
SCNpilot_BF_INOC_scaffold_1368_curated_16
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12217..12960
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI0002ECCA17
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCNpilot_BF_INOC_scaffold_1368_curated_17
unknown

Not on your lists

13163..14218
DNA (1056bp) protein (352aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1368_curated_18
unknown

Not on your lists

14221..15114
DNA (894bp) protein (298aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1368_curated_19
unknown

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comp(15629..15784)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1368_curated_20
unknown

Not on your lists

17721..17885
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying 20 items

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