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SCNPILOT-DEREPLICATED Organisms Analysis

Owner: Rose Kantor

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Displaying items 1-30 of 233 in total
Name ⬇ Taxonomy Completeness Size % GC Cov # Ctg # Genes Max ctg.
scnpilot_dereplicated_Xanthomonadales_3
scnpilot-dereplicated_Xanthomonadales_63_1

curated

Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 3.75 Mbp 63.38 % 1.00 36 3251 365109
scnpilot_dereplicated_Xanthomonadales_2
scnpilot-dereplicated_Xanthomonadales_69_1

curated

Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 5.81 Mbp 68.55 % 1.00 31 4783 700515
scnpilot_dereplicated_Xanthomonadales_1
scnpilot-dereplicated_Xanthomonadales_66_1

curated

Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 11 / 38 3.73 Mbp 65.55 % 1.00 16 3283 1087631
scnpilot_dereplicated_Virus_unknown_3
SCNPILOT_EXPT_750_P_unknown_38_17

from ESOM

Phage
RP 0 / 55 BSCG 1 / 51 ASCG 1 / 38 713.25 Kbp 38.00 % 16.78 41 748 42176
scnpilot_dereplicated_Virus_unknown_2
SCNPILOT_CONT_300_BF_unknown_69_9

from TS-ESOM

Phage
RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38 194.49 Kbp 68.59 % 9.04 4 277 100793
scnpilot_dereplicated_Virus_unknown_1
SCNPILOT_CONT_300_BF_unknown_16_4

from TS-ESOM, likely infects Eukaryotes

Phage
RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38 142.78 Kbp 16.06 % 4.21 24 93 7772
scnpilot_dereplicated_Verrucomicrobia_1
scnpilot-dereplicated_Bacteria_61_1

curated

Bacteria
near complete RP 51 / 55 MC: 2 BSCG 48 / 51 MC: 4 ASCG 14 / 38 5.06 Mbp 60.63 % 1.00 407 4911 89353
scnpilot_dereplicated_Variovorax_1
scnpilot-dereplicated_Variovorax_67_1

curated

Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1 7.95 Mbp 67.28 % 1.00 55 7234 791782
scnpilot_dereplicated_TM7_2
scnpilot-dereplicated_Candidatus_Saccharibacteria_47_1

curated

Candidatus Saccharibacteria, Bacteria
near complete RP 49 / 55 MC: 1 BSCG 48 / 51 ASCG 11 / 38 MC: 2 900.47 Kbp 46.59 % 1.00 1 918 900471
scnpilot_dereplicated_TM7_1
scnpilot-dereplicated_Candidatus_Saccharibacteria_49_1

curated

Candidatus Saccharibacteria, Bacteria
near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 11 / 38 MC: 1 904.90 Kbp 49.49 % 1.00 1 933 904897
scnpilot_dereplicated_Thiobacillus_6
scnpilot-dereplicated_Hydrogenophilales_65_1

curated

Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 7 ASCG 12 / 38 MC: 2 3.10 Mbp 64.69 % 1.00 222 3243 110505
scnpilot_dereplicated_Thiobacillus_5
scnpilot-dereplicated_Hydrogenophilales_65_1

curated

Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1 2.90 Mbp 65.42 % 1.00 61 2855 250795
scnpilot_dereplicated_Thiobacillus_4
scnpilot-dereplicated_Hydrogenophilales_65_1

curated

Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38 2.96 Mbp 64.76 % 1.00 20 2946 601343
scnpilot_dereplicated_Thiobacillus_3
scnpilot-dereplicated_Hydrogenophilales_63_1

curated

Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 3.21 Mbp 63.25 % 1.00 74 3212 265781
scnpilot_dereplicated_Thiobacillus_2
scnpilot-dereplicated_Hydrogenophilales_65_1

curated

Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 3 ASCG 13 / 38 2.91 Mbp 65.08 % 1.00 143 2990 135022
scnpilot_dereplicated_Thiobacillus_1
scnpilot-dereplicated_Hydrogenophilales_62_1

curated

Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1 3.66 Mbp 62.32 % 1.00 24 3592 858717
scnpilot_dereplicated_Stenotrophomonas_1
scnpilot-dereplicated_Stenotrophomonas_69_1

curated

Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 3.69 Mbp 69.32 % 1.00 27 3291 686202
scnpilot_dereplicated_Spirosoma_1
scnpilot-dereplicated_Spirosoma_48_1

curated

Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1 8.68 Mbp 48.24 % 1.00 89 7429 746668
scnpilot_dereplicated_Sphingopyxis_1
scnpilot-dereplicated_Sphingopyxis_sp__MC1_65_1

curated

Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38 3.29 Mbp 64.68 % 1.00 103 3347 185849
scnpilot_dereplicated_Sphingomonas_3
scnpilot-dereplicated_Sphingomonas_66_1

curated

Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38 5.39 Mbp 66.13 % 1.00 170 5093 508409
scnpilot_dereplicated_Sphingomonas_2
scnpilot-dereplicated_Sphingomonas_67_1

curated

Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1 4.99 Mbp 67.29 % 1.00 36 4706 1176011
scnpilot_dereplicated_Sphingomonas_1
scnpilot-dereplicated_Sphingomonas_67_1

curated

Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38 4.00 Mbp 67.40 % 1.00 32 3815 417620
scnpilot_dereplicated_Sphingomonadales_1
scnpilot-dereplicated_Sphingomonadales_62_1

curated

Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38 3.51 Mbp 62.35 % 1.00 210 3436 100134
scnpilot_dereplicated_Sphingobium_2
scnpilot-dereplicated_Sphingobium_66_1

curated

Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1 4.00 Mbp 65.61 % 1.00 38 3852 675324
scnpilot_dereplicated_Sphingobacterium_1
scnpilot-dereplicated_Sphingobacterium_40_1

curated

Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 6.32 Mbp 40.07 % 1.00 73 5473 458385
scnpilot_dereplicated_Sphingobacteriales_8
scnpilot-dereplicated_Sphingobacteriales_44_1

curated

Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 6.01 Mbp 44.02 % 1.00 46 4960 597497
scnpilot_dereplicated_Sphingobacteriales_7
scnpilot-dereplicated_Sphingobacteriales_48_1

curated

Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
near complete RP 53 / 55 BSCG 50 / 51 ASCG 11 / 38 4.84 Mbp 47.78 % 1.00 28 4176 721048
scnpilot_dereplicated_Sphingobacteriales_6
scnpilot-dereplicated_Sphingobacteriales_40_1

curated

Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 6.14 Mbp 40.05 % 1.00 79 5158 543782
scnpilot_dereplicated_Sphingobacteriales_5
scnpilot-dereplicated_Sphingobacteriales_41_1

curated

Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
near complete RP 46 / 55 MC: 2 BSCG 41 / 51 MC: 1 ASCG 9 / 38 3.13 Mbp 40.68 % 1.00 245 3032 79520
scnpilot_dereplicated_Sphingobacteriales_4
scnpilot-dereplicated_Sphingobacteriales_50_1

curated

Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 7.90 Mbp 50.31 % 1.00 27 6623 1138547
Displaying items 1-30 of 233 in total