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scnpilot_solids1_trim150_scaffold_108_47

Organism: SCNPILOT_SOLID_1_TRIM150_Plasmid_2

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(43762..44382)

Top 3 Functional Annotations

Value Algorithm Source
Putative GntR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJU4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 39.7
  • Coverage: 199.0
  • Bit_score: 113
  • Evalue 3.60e-22
Transcriptional regulator, gntr family {ECO:0000313|EMBL:KFG89441.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 206.0
  • Bit_score: 240
  • Evalue 2.80e-60
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 199.0
  • Bit_score: 113
  • Evalue 1.10e-22

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Taxonomy

Sphingobium herbicidovorans → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGAGTCCCGGCGCGACGATGGAACTCGTCTATGCCGAGCTCAAGGCGAAGGTGATGCGCGGCGACTTCGCGCCGGGGGAGCGGCTCGAACCCGCGCAACTTGCGAGGGTGCTTGGCGTCAGCCCGACGCCGGTCCGCGACGCCCTCTACCGGCTTTCGGGCGAAAGGCTGCTCGAAGCCTGGCGTCACGAAGGGTTTCGGCAACCGATACTGGCCGAAGCCGACCTCCACGACCTTTATGCCTGGGGCGCGTCGCTTCTGGCGCTGGCGCTCGAGGGGCAGCCGCCCGACCCCCACATTCCGCAGAGATCGTTCAGCGACTCAGGCGCCGGCGATTATCCCGAGCGGGTTGCGGCGCTGTTTCGGGCGATCGCCTGGACCAACTCTAATCGAGAACTTCGATTTGCGACGGTGAGTTTGATCGAACGCTGCCATGTGTTTCGGGCCGCCGAAGTACGCGTCGACCGGCGGAGCGACGCGGCGATCATCGCGATGGACGATGATTTTCGTTTCGGGCGCTGGAGCGCCTTGCGCAGCAAAATCACACGTTTCCATCGCCGCCGTATCCTTCTCGCGGGCCGCGTCGTGGCGGAACTCAGGCCGCGCGAAGAGTCGCTCTAG
PROTEIN sequence
Length: 207
MSPGATMELVYAELKAKVMRGDFAPGERLEPAQLARVLGVSPTPVRDALYRLSGERLLEAWRHEGFRQPILAEADLHDLYAWGASLLALALEGQPPDPHIPQRSFSDSGAGDYPERVAALFRAIAWTNSNRELRFATVSLIERCHVFRAAEVRVDRRSDAAIIAMDDDFRFGRWSALRSKITRFHRRRILLAGRVVAELRPREESL*