name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids1_trim150_scaffold_108_31
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24984..26396
|
Conjugal transfer protein TraH n=2 Tax=Sphingomonadaceae RepID=T0G3R7_9SPHN
rbh
Sex pilus assembly protein TraH {ECO:0000313|EMBL:AJA09651.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
TraH family protein; K12072 conjugative transfer pilus assembly protein TraH
rbh
|
|
scnpilot_solids1_trim150_scaffold_108_32
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26402..30136
|
DNA transfer and F pilus assembly protein TraG n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6ESV8_SPHCR
rbh
DNA transfer and F pilus assembly protein TraG {ECO:0000313|EMBL:AJA09652.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
DNA transfer and F pilus assembly protein TraG; K12056 conjugal transfer mating pair stabilization protein TraG
rbh
|
|
scnpilot_solids1_trim150_scaffold_108_33
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30133..30579)
|
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2GRX6_9SPHN
Putative membrane protein {ECO:0000313|EMBL:AJA09653.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
|
|
scnpilot_solids1_trim150_scaffold_108_34
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31383..31622
|
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SBY8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AJA09654.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
|
|
scnpilot_solids1_trim150_scaffold_108_35
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31626..32054
|
PilT protein domain-containing protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SAQ6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AJA09655.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
PilT protein domain-containing protein
|
|
scnpilot_solids1_trim150_scaffold_108_36
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32051..32974)
|
Putative nucleotidyltransferase n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z5C5_SPHJU
rbh
Putative nucleotidyltransferase {ECO:0000313|EMBL:KFG88635.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
putative nucleotidyltransferase
rbh
|
|
scnpilot_solids1_trim150_scaffold_108_37
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33008..33322)
|
Plasmid stabilization system n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJZ9_9SPHN
Plasmid stabilization system {ECO:0000313|EMBL:EHJ58367.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
plasmid stabilization system protein
|
|
scnpilot_solids1_trim150_scaffold_108_38
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33325..33582)
|
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPQ6_SPHAL
ParD protein {ECO:0000313|EMBL:GAO52923.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
scnpilot_solids1_trim150_scaffold_108_39
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33989..34225)
|
UPI0003D0497F related cluster n=1 Tax=unknown RepID=UPI0003D0497F
RNA polymerase sigma factor {ECO:0000313|EMBL:ESZ86433.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
|
|
scnpilot_solids1_trim150_scaffold_108_40
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34603..35187
|
ECF-type sigma factor n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z5F9_SPHJU
ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
|
|
scnpilot_solids1_trim150_scaffold_108_41
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
35184..36146
|
FecR/PupR family sigma factor regulatory protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B248
anti-FecI sigma factor FecR
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
|
|
scnpilot_solids1_trim150_scaffold_108_42
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
36205..39141
|
Outer membrane cobalamin receptor protein n=1 Tax=Caulobacter sp. AP07 RepID=J3ATH8_9CAUL
TonB-dependent receptor
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
|
|
scnpilot_solids1_trim150_scaffold_108_43
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
39135..41090
|
Prolyl oligopeptidase family protein n=1 Tax=Caulobacter sp. AP07 RepID=J2H410_9CAUL
Putative peptidase {ECO:0000313|EMBL:KFG89437.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein
|
|
scnpilot_solids1_trim150_scaffold_108_44
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(41134..42834)
|
putative asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Asparagine synthase (Glutamine-hydrolyzing) n=1 Tax=Caulobacter sp. AP07 RepID=J3AUC5_9CAUL
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
|
|
scnpilot_solids1_trim150_scaffold_108_45
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(42831..43481)
|
Uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGU8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KFG89439.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
hypothetical protein
|
|
scnpilot_solids1_trim150_scaffold_108_46
unknown
|
Not on your lists |
comp(43526..43660)
|
This feature has no annotations |
|
scnpilot_solids1_trim150_scaffold_108_47
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(43762..44382)
|
Putative GntR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJU4_9SPHN
Transcriptional regulator, gntr family {ECO:0000313|EMBL:KFG89441.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
GntR family transcriptional regulator
|
|
scnpilot_solids1_trim150_scaffold_108_48
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(44379..45284)
|
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00037DCF1D
Uncharacterized protein {ECO:0000313|EMBL:KFG89442.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
Phytanoyl-CoA dioxygenase
|
|
scnpilot_solids1_trim150_scaffold_108_49
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(45295..45909)
|
Acyl-homoserine-lactone synthase {ECO:0000256|RuleBase:RU361135}; EC=2.3.1.184 {ECO:0000256|RuleBase:RU361135};; Autoinducer synthesis protein {ECO:0000256|RuleBase:RU361135}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
N-acyl-L-homoserine lactone synthetase n=1 Tax=Sphingobium sp. AP49 RepID=J2CNY0_9SPHN
autoinducer synthesis protein
|
|
scnpilot_solids1_trim150_scaffold_108_50
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(45989..46729)
|
LuxR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJU1_9SPHN
LuxR family transcriptional regulator {ECO:0000313|EMBL:KFG89444.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
LuxR family transcriptional regulator
|
|
scnpilot_solids1_trim150_scaffold_108_51
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
47076..47594
|
Uncharacterized protein n=2 Tax=Sphingobium RepID=T0H4B3_9SPHN
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:KFG89449.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
LuxR family transcriptional regulator
|
|
scnpilot_solids1_trim150_scaffold_108_52
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
47655..47987
|
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQ78_SPHAL
Uncharacterized protein {ECO:0000313|EMBL:AJA09661.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
|
|
scnpilot_solids1_trim150_scaffold_108_53
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
48027..48500
|
Uncharacterized protein n=2 Tax=Sphingobium RepID=T0IDS2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB51972.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
hypothetical protein
|
|
scnpilot_solids1_trim150_scaffold_108_54
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
48593..49432
|
DNA repair protein RadC n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQ77_SPHAL
DNA repair protein RadC {ECO:0000313|EMBL:KGB59364.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
DNA repair protein RadC
|
|
scnpilot_solids1_trim150_scaffold_108_55
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
49668..50429
|
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D7U9_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:KFG89445.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
hypothetical protein
|
|
scnpilot_solids1_trim150_scaffold_108_56
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(50466..50978)
|
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CM74_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:AJA09676.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
|
|
scnpilot_solids1_trim150_scaffold_108_57
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(51100..54036)
|
UPI0003D5FAD8 related cluster n=1 Tax=unknown RepID=UPI0003D5FAD8
rbh
TraI/trwC-like protein {ECO:0000313|EMBL:AJA09677.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
TrwC protein
rbh
|
|
scnpilot_solids1_trim150_scaffold_108_58
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(54033..56060)
|
Type IV conjugative transfer system coupling protein TraD n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CQZ0_SPHYA
rbh
VirD4/TraD-like protein {ECO:0000313|EMBL:AJA09678.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
VirD4/TraD-like protein
rbh
|
|
scnpilot_solids1_trim150_scaffold_108_59
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(56057..56380)
|
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000362644D
Uncharacterized protein {ECO:0000313|EMBL:AJA09679.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
|
|
scnpilot_solids1_trim150_scaffold_108_60
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
56802..57107
|
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IHS8_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA93959.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
|