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scnpilot_solids1_trim150_scaffold_108_54

Organism: SCNPILOT_SOLID_1_TRIM150_Plasmid_2

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 48593..49432

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RadC n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQ77_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 50.7
  • Coverage: 286.0
  • Bit_score: 260
  • Evalue 1.90e-66
DNA repair protein RadC {ECO:0000313|EMBL:KGB59364.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 283.0
  • Bit_score: 298
  • Evalue 8.90e-78
DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 286.0
  • Bit_score: 260
  • Evalue 6.00e-67

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Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
GTGATCGACCTGCTCCTCTGCACGCGGCGCGCGATGCTCGCATCGATGCGCGGCAGGCTCTATTCGAGGCGGATCGATCCGGACGATGCGAAACTCGGAGACTATCTCATCGCATCCATGGGGTCGCTCGCCGACGAACATCTGCGCATCCTGTTCCTCGATGGGTCGCGCCATCTTATTGCCGATGAATGCCTGCAAAGCGGCAGCCTCGCCCATTTGGCGCTCTATCCGAGGGTCATCTTCCGCCGCGCGCTCGAACTCAATGCCGCCGCGATTCTGCTCGTCCACAATCATCCGAGCGGAAATCCGCATCCGAGCGACGAGGACATCGAAGCAACGCGCCGCCTCGCGGATATCGGACATGCTCTCGATATCCGGCTGTCGGGTCATATTGTCGTGACCGCAAACCAGACATCACGGATAATCGTCGATGATACGGCCCGACGCGGCACCTTCTCCTTCACCCTGAAGAGCCCCGATACCGCCGCCGATCGGCGGGCCAAGGCAGAGCTCGTGCTGACCAACGCGCGCATCACGCAGCGTCGCCGCTTTCTGCGCCGACAACTTATTGGCGCCGAATGTCTTTTCGTCGAGCCTGCCTGGGACATGCTGCTCGACCTGTTCATCCACCAGTGCGAAGGCCGGGTGCTCCATCTATATCCCATGTGCGTCGCATCGGGCATCCCGATGAGCAGCGCGCTACGACTCGCCCAAAAGCTCTGCGAAGCAGGCATATTACGGCGGCAGCCCGATACCTTCGACGGGCGACGGAGCATCATGACGATCGAGCTCGAGATTATGCATCGACTCAGCGCCTATTTTGCGGAAGGTGCCGAATAG
PROTEIN sequence
Length: 280
VIDLLLCTRRAMLASMRGRLYSRRIDPDDAKLGDYLIASMGSLADEHLRILFLDGSRHLIADECLQSGSLAHLALYPRVIFRRALELNAAAILLVHNHPSGNPHPSDEDIEATRRLADIGHALDIRLSGHIVVTANQTSRIIVDDTARRGTFSFTLKSPDTAADRRAKAELVLTNARITQRRRFLRRQLIGAECLFVEPAWDMLLDLFIHQCEGRVLHLYPMCVASGIPMSSALRLAQKLCEAGILRRQPDTFDGRRSIMTIELEIMHRLSAYFAEGAE*