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scnpilot_solids1_trim150_scaffold_108_58

Organism: SCNPILOT_SOLID_1_TRIM150_Plasmid_2

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(54033..56060)

Top 3 Functional Annotations

Value Algorithm Source
Type IV conjugative transfer system coupling protein TraD n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CQZ0_SPHYA similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 715.0
  • Bit_score: 945
  • Evalue 4.10e-272
  • rbh
VirD4/TraD-like protein {ECO:0000313|EMBL:AJA09678.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 691.0
  • Bit_score: 1033
  • Evalue 0.0
VirD4/TraD-like protein similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 700.0
  • Bit_score: 931
  • Evalue 1.50e-268
  • rbh

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Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2028
ATGAGCATCTTTCGCAACGACACCCTCGGAAGCTGGACGCGCGGCGGCCAAGCTATCGTCCACAATGTCCGCATGACCACCCAGGTCTTCTTCCAGACCGTGATGGCGGGAACCGCGATCTGGATCATCGGCGCCATCTGGTACGCGCTCGAAAAGTCGGGCGATTATCAGCGCTACCTTCTCCTCAAATATGCCGAGGCCCTGTTCAAGTCCGATACGGCGCGAGGGACCACCGACCCGGTGCTGTTCCGCAGCCCCGAGGGGCGTGAATATTGGACCTCGGCCGACCTGCTCATCGGCGCGCCGATCATGAAGGAAGCGCTGAAAACGCTCGAGAGCGACATCATCACCGGGGCGATCCTCTCCGGTTTCTTCGCGCTCGGCGCGCTCCTCGTCGCCTGGTTCTATTTTACCCGGATGGGGCGTGGACTCGGTTCGAACGAATATCTGCGCGGCGCGCGCTTCGGGTCCGTCTGGCAAATCCGCCGCGCGCTCTGGCGCGAACGCAAGGGGAGTTTCGCGATCGGCGGCGTCAAGGTTCCGCTTGCTTTCGAGCCCGAACATATATTGATCTGCGGGGCTCCCGGCACGGGCAAGACCAACATGATCGTCAAGATGCTCGCCGGCATCCGCGCCTCGGGCCGGCGCGCGATCGTCTATGATACCGCCGGCACCTTCGTCGAGAAATTCTACCGGCCCGGGAAGGACATCCTCCTCAATCCGCTCGACAAGCGAACCGCCATCTGGTCGCCCTGGGTCGATGTCCCGCGCGACTATCATTATGACCAGATCGCGGAATCGATGATCCCGGACAAGCATGGCGACCCCTTCTGGTCGAAGGCCGCGCGCGGGACTCTGGTCGCAGTCATGCGCAAGCTCGCGGCCGAGAAGCGCACCTATGTCTCGGCGCTCCTCGAGACCATCGTGCGTTCGCCGCTGAAGACCCTCGGCGCCTATGTCGCGGGGACCGATGCGGCGGCCTTTGTGTCGTCGGAAGGCGAGCGGACCTCGGCGGGGGTGCAGGCCGAGCTTGCCTCGGTAATGCGCAGCTTCGCCTATCTCGACGATACCGACGATGGTCTCTCGATCCGCGACTGGGTGACCACCGAGGGGGATGACAGCTGGCTTTTCATCACCGTCAAGGCCGACCAGCTTCCGTCGCTCCGCCCCCTGATCACCGTCTGGCTCGACATTGCGATCAGCGCGATCATGAGCCTTGAACCCGATCAGGCCCGGCGCCTCTATTGCGTGATCGACGAGCTGCCGAGCCTCCAGAAACTGCCCTCGCTTTCGGATTTTCTCGCCCGCGCCCGCAAATATGGCGGCTGCGGCATTTTGGGGTTCCAGTCCTATCCGCAGCTGAAAGCAACCTATGGCCAGGAGGAAGCCGCCGCCGTGACCGGCTATTGCTCGACCTGGGTCGCACTCCGGGGGAACGACGGCGACACCGCCGATCTCGTCTCGAAGAATCTGGGACAGGTCGAGCAGGTCGAAGCCAATGAGGGGATGAGCTACGGCGTCAATGATATGCGCGACGGGGTCAATCTCTCGCGCATCCAGGTGACGCGGCCGCTCGTCCTCCACACCGAGGTCACGAACCTGCCGAACCTTGCAGGCTTCTTGCGCTTCGGCCGCGGCTTGCCGGTGATCCGGTTCGACGATCGCTACAACCGGACGCCGTCCTCCGCGGAGGCTTTCATCGAGCGGAGCGATCCCCCGCTGCGCACCGTGTCGACCCCTTCGCTGCCTGCTCCCGCTGCTCCATCCAAACCGCCTGCCACGCGCAAGCGCCCGCCGAAACAGGCCGCCGGTTCGGCGGCGCCCGAACTTCCTCTGGGTCCGGTCGCCACCGCTGGCGATGGCGACAAAGGCGACGGAAAGGCGCCGATCGATCCTGCCGGTGGTATCGGGGGACATGACCCCGATGCGCCGATTGCACGCCTCGAGATCATCGCCACGCCGTGGACGCACTCGCTTCGCCAGCACGGTCGCCCGGGCGGCCGCCGCAGTCCCGCGAATCCGGCATGA
PROTEIN sequence
Length: 676
MSIFRNDTLGSWTRGGQAIVHNVRMTTQVFFQTVMAGTAIWIIGAIWYALEKSGDYQRYLLLKYAEALFKSDTARGTTDPVLFRSPEGREYWTSADLLIGAPIMKEALKTLESDIITGAILSGFFALGALLVAWFYFTRMGRGLGSNEYLRGARFGSVWQIRRALWRERKGSFAIGGVKVPLAFEPEHILICGAPGTGKTNMIVKMLAGIRASGRRAIVYDTAGTFVEKFYRPGKDILLNPLDKRTAIWSPWVDVPRDYHYDQIAESMIPDKHGDPFWSKAARGTLVAVMRKLAAEKRTYVSALLETIVRSPLKTLGAYVAGTDAAAFVSSEGERTSAGVQAELASVMRSFAYLDDTDDGLSIRDWVTTEGDDSWLFITVKADQLPSLRPLITVWLDIAISAIMSLEPDQARRLYCVIDELPSLQKLPSLSDFLARARKYGGCGILGFQSYPQLKATYGQEEAAAVTGYCSTWVALRGNDGDTADLVSKNLGQVEQVEANEGMSYGVNDMRDGVNLSRIQVTRPLVLHTEVTNLPNLAGFLRFGRGLPVIRFDDRYNRTPSSAEAFIERSDPPLRTVSTPSLPAPAAPSKPPATRKRPPKQAAGSAAPELPLGPVATAGDGDKGDGKAPIDPAGGIGGHDPDAPIARLEIIATPWTHSLRQHGRPGGRRSPANPA*