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scnpilot_solids1_trim150_scaffold_659

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_659_1
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..442
DNA (441bp) protein (147aa)
Transposase Tn1721 n=1 Tax=Pseudomonas aeruginosa DHS01 RepID=V4ZB66_PSEAI
transposase
Tn4653 transposase {ECO:0000313|EMBL:CAC86846.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Arthrobacter siderocapsulatus).;"
scnpilot_solids1_trim150_scaffold_659_2

Not on your lists

comp(633..1856)
DNA (1224bp) protein (408aa)
Replication initiation protein n=1 Tax=uncultured bacterium RepID=J9RT84_9BACT rbh
Replication initiation protein {ECO:0000313|EMBL:AFR43728.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
TrfA family protein rbh
scnpilot_solids1_trim150_scaffold_659_3

Not on your lists

comp(1904..2242)
DNA (339bp) protein (113aa)
Single-stranded DNA-binding protein n=2 Tax=Bacteria RepID=A1WDQ0_ACISJ
single-strand binding protein; K03111 single-strand DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_solids1_trim150_scaffold_659_4

Not on your lists

2351..2713
DNA (363bp) protein (121aa)
Helix-turn-helix domain protein n=3 Tax=Bacteria RepID=A1WDP9_ACISJ
conjugal transfer protein TrbA
TrbA {ECO:0000313|EMBL:AEV56642.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_solids1_trim150_scaffold_659_5
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3024..3989
DNA (966bp) protein (322aa)
Type II secretion system protein E n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDP8_ACISJ rbh
conjugal transfer ATPase TrbB; K03196 type IV secretion system protein VirB11 rbh
Type II secretion system protein E {ECO:0000313|EMBL:ABM44373.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_659_6

Not on your lists

4002..4466
DNA (465bp) protein (155aa)
Conjugal transfer protein TrbC n=2 Tax=Bacteria RepID=A1WDP7_ACISJ rbh
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2 rbh
Conjugative transfer protein {ECO:0000313|EMBL:AFV47182.1}; TrbC conjugal transfer protein {ECO:0000313|EMBL:CAG26000.1}; Flags: Precursor;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_solids1_trim150_scaffold_659_7
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4470..4781
DNA (312bp) protein (104aa)
Conjugal transfer TrbD family protein n=19 Tax=Bacteria RepID=A1WDP6_ACISJ
conjugal transfer protein TrbD; K03198 type IV secretion system protein VirB3
TrbD {ECO:0000313|EMBL:AFJ38119.1}; TaxID=1168066 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="Mycobacterium abscessus subsp. bolletii F1725.;"
scnpilot_solids1_trim150_scaffold_659_8
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4778..7336
DNA (2559bp) protein (853aa)
Type IV secretion/conjugal transfer ATPase, VirB4 family n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDP5_ACISJ rbh
Type IV secretion/conjugal transfer ATPase, VirB4 family {ECO:0000313|EMBL:ABM44370.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
conjugal transfer protein TrbE; K03199 type IV secretion system protein VirB4 rbh
scnpilot_solids1_trim150_scaffold_659_9
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7333..8115
DNA (783bp) protein (261aa)
Conjugal transfer protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDP4_ACISJ rbh
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 rbh
Conjugal transfer protein {ECO:0000313|EMBL:ABM44369.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_659_10

Not on your lists

8133..9032
DNA (900bp) protein (300aa)
Conjugal transfer protein TrbG/VirB9/CagX n=2 Tax=Bacteria RepID=A1WDP3_ACISJ rbh
conjugal transfer protein TrbG; K03204 type IV secretion system protein VirB9 rbh
TrbG {ECO:0000313|EMBL:AEV56648.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_solids1_trim150_scaffold_659_11
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9035..9523
DNA (489bp) protein (163aa)
Conjugal transfer TrbH family protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDP2_ACISJ rbh
conjugal transfer protein TrbH rbh
Conjugal transfer TrbH family protein {ECO:0000313|EMBL:ABM44367.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_659_12
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9528..10946
DNA (1419bp) protein (473aa)
Conjugation TrbI family protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDP1_ACISJ rbh
conjugal transfer protein TrbI; K03195 type IV secretion system protein VirB10 rbh
Conjugation TrbI family protein {ECO:0000313|EMBL:ABM44366.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_659_13
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10964..11728
DNA (765bp) protein (255aa)
TrbJ protein of DNA transfer system n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDP0_ACISJ rbh
conjugal transfer protein TrbJ rbh
TrbJ protein of DNA transfer system {ECO:0000313|EMBL:ABM44365.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_659_14
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11738..11965
DNA (228bp) protein (76aa)
Entry exclusion protein TrbK n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDN9_ACISJ
entry exclusion protein TrbK
Entry exclusion protein TrbK {ECO:0000313|EMBL:ABM44364.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_659_15
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11976..13709
DNA (1734bp) protein (578aa)
TrbL/VirB6 plasmid conjugal transfer protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDN8_ACISJ rbh
TrbL/VirB6 plasmid conjugal transfer protein {ECO:0000313|EMBL:ABM44363.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
TrbL/VirB6 plasmid conjugal transfer protein; K03201 type IV secretion system protein VirB6 rbh
scnpilot_solids1_trim150_scaffold_659_16
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13726..14310
DNA (585bp) protein (195aa)
TrbM family protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDN7_ACISJ rbh
conjugal transfer protein TrbM rbh
TrbM family protein {ECO:0000313|EMBL:ABM44362.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_659_17
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14324..14959
DNA (636bp) protein (212aa)
Lytic transglycosylase, catalytic n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDN6_ACISJ rbh
conjugal transfer protein TrbN rbh
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:ABM44361.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_659_18
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14988..15254
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDN5_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM44360.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_659_19
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15254..15952
DNA (699bp) protein (233aa)
TraX family protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDN4_ACISJ rbh
conjugal transfer protein TrbP rbh
TraX family protein {ECO:0000313|EMBL:ABM44359.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_659_20
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15968..16399
DNA (432bp) protein (144aa)
Uncharacterized protein n=15 Tax=Bacteria RepID=A1WDN3_ACISJ
hypothetical protein
Upf30.5 protein {ECO:0000313|EMBL:AJM90418.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
scnpilot_solids1_trim150_scaffold_659_21
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16555..17229
DNA (675bp) protein (225aa)
Phage DNA methylase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDN2_ACISJ rbh
phage DNA methylase rbh
Phage DNA methylase {ECO:0000313|EMBL:ABM44357.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_659_22
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17308..17838
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDN1_ACISJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABM44356.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_659_23
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18007..18240
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDN0_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM44355.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_659_24
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18304..18510)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDM9_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM44354.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_659_25
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18507..18680)
DNA (174bp) protein (58aa)
TNCP26 n=1 Tax=Pseudomonas aeruginosa RepID=Q6X3F4_PSEAI
TNCP26 {ECO:0000313|EMBL:AAP22633.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_659_26
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18677..19540)
DNA (864bp) protein (288aa)
Type II DNA restriction endonuclease R.NGOI n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDM8_ACISJ rbh
type II DNA restriction endonuclease R.NGOI rbh
Type II DNA restriction endonuclease R.NGOI {ECO:0000313|EMBL:ABM44353.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_659_27
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19540..20496)
DNA (957bp) protein (319aa)
DNA-cytosine methyltransferase (EC:2.1.1.37); K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37] rbh
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Cytosine-specific methyltransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDM7_ACISJ rbh
scnpilot_solids1_trim150_scaffold_659_28
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20797..21102
DNA (306bp) protein (102aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDM5_ACISJ
addiction module antitoxin
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:ABM44350.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_659_29
Aeromonas sp. L_1B5_3, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21229..21804
DNA (576bp) protein (192aa)
Invertase/recombinase n=12 Tax=Bacteria RepID=N0DSF1_KLEPN rbh
resolvase domain-containing protein rbh
Contig_42, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ79955.1}; TaxID=1588629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. L_1B5_3.;"
scnpilot_solids1_trim150_scaffold_659_30
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22085..26827)
DNA (4743bp) protein (1581aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDM3_ACISJ rbh
Uncharacterized protein {ECO:0000313|EMBL:ABM44348.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
hypothetical protein rbh
Displaying items 1-30 of 56 in total

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