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scnpilot_solids1_trim150_scaffold_1513_6

Organism: SCNPILOT_SOLID_1_TRIM150_Plasmid_9

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 4524..5249

Top 3 Functional Annotations

Value Algorithm Source
TraF/VirB5 protein n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4S1_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 237.0
  • Bit_score: 409
  • Evalue 2.90e-111
  • rbh
Plasmid, complete sequence {ECO:0000313|EMBL:AJO81920.1}; TaxID=1611770 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. MRSN12121.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 241.0
  • Bit_score: 464
  • Evalue 1.10e-127
Minor pilin of type IV secretion complex (VirB5 similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 241.0
  • Bit_score: 386
  • Evalue 4.80e-105
  • rbh

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Taxonomy

Pseudomonas sp. MRSN12121 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGAAAACTTTCTCTGTCTCTCTCGTGCTGGCCGCCGGCATTGCCGTGTCGTCGGCCGCCTTCGCGCAAATTCCGGTCACTGACGGCGCTTCCATCGCGCAGCAGGTTGCGGCCCAGGTCGAAACCATCGCTAAGTGGAAGATGCAGTACGACCAGATGACCAGCCAAATCAACCAGATGAAGCAGCAATACGAGTCGCTGACCGGCTCGCGGAACCTCGGGCAAATCCTGAATAACTCGGCCCTGCGTGACTACCTGCCGAACGACTGGCAGGGCGTCTATGACGCCGTGAAGTCGGGCGGTTACTCCGGCCTGAGCGGCCGGGCGCAATCCATCTTTGAAGGGAACAAGGTCTATGACCTTTGCGCCAATCTGGCGGATTCCCAACAGCGAACGCATTGTGAAGCCCAGGCCGTCAAAGGTGCCCAGGACAAGGCTTTCGCCCTGGACGCCTACGACAAGGCCAAGTCACGGCTGACCCAAATCGACCAGCTCATGGCGAAGATCAACGACACGCCCGACCCCAAGGCTATTGCCGAGCTGCAAGGCCGTATCGCGGCCGAGCAGGCCATGATTCAGAACGAGCAAACCAAGCTCCAGATGTATCAGATGGTCGCGTCGGCCGAAGATCGCTTGCAGGAACAGCGGCAACGCGAAATCAACGCCAAGGTTCTGAGCAATCGTGAATACACGAAGCACCAGCCTTTCAACCTGCTGGACAAGTGA
PROTEIN sequence
Length: 242
MKTFSVSLVLAAGIAVSSAAFAQIPVTDGASIAQQVAAQVETIAKWKMQYDQMTSQINQMKQQYESLTGSRNLGQILNNSALRDYLPNDWQGVYDAVKSGGYSGLSGRAQSIFEGNKVYDLCANLADSQQRTHCEAQAVKGAQDKAFALDAYDKAKSRLTQIDQLMAKINDTPDPKAIAELQGRIAAEQAMIQNEQTKLQMYQMVASAEDRLQEQRQREINAKVLSNREYTKHQPFNLLDK*