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scnpilot_solids1_trim150_scaffold_1513

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1513_1
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..295)
DNA (294bp) protein (98aa)
Putative relaxase protein MobC n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4S6_9XANT
Uncharacterized protein {ECO:0000313|EMBL:GAE52556.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. MAFF 311562.;"
mobilisation protein
scnpilot_solids1_trim150_scaffold_1513_2
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

672..1100
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4S5_9XANT
Uncharacterized protein {ECO:0000313|EMBL:GAE48496.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. MAFF 311562.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1513_3
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1106..1810
DNA (705bp) protein (235aa)
Putative plasmid stable inheritance protein n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4S4_9XANT rbh
Plasmid stability protein StbB {ECO:0000313|EMBL:GAE48497.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. MAFF 311562.;"
stbB_1; plasmid stability protein StbB rbh
scnpilot_solids1_trim150_scaffold_1513_4
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1820..2374
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4S3_9XANT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCC18693.1}; TaxID=1045865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. CFBP 5530.;"
scnpilot_solids1_trim150_scaffold_1513_5
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2371..3978
DNA (1608bp) protein (536aa)
TraD protein n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4S2_9XANT rbh
TraD protein {ECO:0000313|EMBL:CCC18692.1}; TaxID=1045865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. CFBP 5530.;"
trwB; Type IV secretion system protein rbh
scnpilot_solids1_trim150_scaffold_1513_6
Pseudomonas sp. MRSN12121, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4524..5249
DNA (726bp) protein (242aa)
TraF/VirB5 protein n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4S1_9XANT rbh
Plasmid, complete sequence {ECO:0000313|EMBL:AJO81920.1}; TaxID=1611770 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. MRSN12121.;"
Minor pilin of type IV secretion complex (VirB5 rbh
scnpilot_solids1_trim150_scaffold_1513_7
Pseudomonas sp. MRSN12121, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5261..5740
DNA (480bp) protein (160aa)
Putative membrane protein n=1 Tax=Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85) RepID=Q5H5B2_XANOR
Plasmid, complete sequence {ECO:0000313|EMBL:AJO81899.1}; TaxID=1611770 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. MRSN12121.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1513_8
Pseudomonas sp. MRSN12121, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5737..5997
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Alcaligenes RepID=M5ITZ6_9BURK
Plasmid, complete sequence {ECO:0000313|EMBL:AJO81900.1}; TaxID=1611770 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. MRSN12121.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1513_9
Pseudomonas sp. MRSN12121, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5999..7075
DNA (1077bp) protein (359aa)
Integral inner membrane protein of type IV secretion complex (VirB6) n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XXX3_ALCXX rbh
Plasmid, complete sequence {ECO:0000313|EMBL:AJO81901.1}; TaxID=1611770 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. MRSN12121.;"
Integral inner membrane protein of type IV secretion complex (VirB6 rbh
scnpilot_solids1_trim150_scaffold_1513_10
Pseudomonas sp. MRSN12121, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7079..7381
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4R7_9XANT
Plasmid, complete sequence {ECO:0000313|EMBL:AJO81902.1}; TaxID=1611770 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. MRSN12121.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1513_11
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7378..7536
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85) RepID=Q05HP1_XANOR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ89869.1}; TaxID=291331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85).;"
scnpilot_solids1_trim150_scaffold_1513_12
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9316..10482)
DNA (1167bp) protein (389aa)
Plasmid replication protein RepA1 n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4P2_9XANT rbh
Plasmid replication protein RepA1 {ECO:0000313|EMBL:CCC18662.1}; TaxID=1045865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. CFBP 5530.;"
plasmid encoded RepA protein
scnpilot_solids1_trim150_scaffold_1513_13
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10588..10962)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4T5_9XANT
Transcriptional regulator {ECO:0000313|EMBL:GAE52566.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. MAFF 311562.;"
scnpilot_solids1_trim150_scaffold_1513_14
Pseudomonas sp. MRSN12121, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11053..11361)
DNA (309bp) protein (103aa)
plasmid stabilization protein n=1 Tax=Marinobacter lipolyticus RepID=UPI00035FD32D
Plasmid, complete sequence {ECO:0000313|EMBL:AJO81904.1}; TaxID=1611770 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. MRSN12121.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1513_15
Pseudomonas sp. MRSN12121, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11365..12189)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Pseudomonas syringae RepID=I3W0F9_PSESX
Plasmid, complete sequence {ECO:0000313|EMBL:AJO81905.1}; TaxID=1611770 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. MRSN12121.;"
scnpilot_solids1_trim150_scaffold_1513_16
Pseudomonas sp. MRSN12121, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12186..12638)
DNA (453bp) protein (151aa)
Complete genome; segment 8/17 n=1 Tax=Photorhabdus luminescens subsp. laumondii (strain TT01) RepID=Q7N4G7_PHOLL
Plasmid, complete sequence {ECO:0000313|EMBL:AJO81906.1}; TaxID=1611770 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. MRSN12121.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1513_17
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12901..13080
DNA (180bp) protein (60aa)
Integrase catalytic region n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G764_ALIDK
TniA transposase; K07497 putative transposase
Integrase catalytic region {ECO:0000313|EMBL:AEB84308.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Displaying 17 items

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