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scnpilot_solids2_trim150_scaffold_764

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_764_1
unknown

Not on your lists

2..235
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_764_2
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

508..1398
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00037ECE37
I protein {ECO:0000313|EMBL:CDN54750.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
Mu-like prophage I protein
scnpilot_solids2_trim150_scaffold_764_3
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1432..1836
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6XF41_9RHOO
Bacteriophage protein {ECO:0000313|EMBL:AJF07769.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterraneus.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_764_4
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1892..2785
DNA (894bp) protein (298aa)
Major head subunit protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RIZ8_DESPD rbh
Mu-like prophage major head subunit gpT {ECO:0000313|EMBL:AJF07768.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterraneus.;"
major head subunit protein rbh
scnpilot_solids2_trim150_scaffold_764_5
unknown

Not on your lists

2884..3141
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_764_trna_1
unknown

Not on your lists

3148..3219
DNA (72bp)
transferRNA Met
scnpilot_solids2_trim150_scaffold_764_6
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3388..3819
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WG34_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EEQ96341.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_764_7
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3819..4301
DNA (483bp) protein (161aa)
Prophage MuSo2 protein n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CFL7_9RHOB
Prophage MuSo2 protein {ECO:0000313|EMBL:EFO33221.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_764_8
unknown

Not on your lists

4298..4900
DNA (603bp) protein (201aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_764_9
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4897..5442
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00035FBE67
Phage P2 baseplate assembly protein GPV-like protein {ECO:0000313|EMBL:ELT46877.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
scnpilot_solids2_trim150_scaffold_764_10
unknown

Not on your lists

5455..5703
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_764_11
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5709..6101
DNA (393bp) protein (131aa)
Phage-related baseplate assembly protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J638_POLGS
gp25; phage-related baseplate assembly protein; K06903
Phage-related baseplate assembly protein {ECO:0000313|EMBL:ADZ72402.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
scnpilot_solids2_trim150_scaffold_764_12
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6098..7018
DNA (921bp) protein (307aa)
Putative phage-related baseplate assembly protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I7S7_AZOC5 rbh
phage-related baseplate assembly protein rbh
Putative phage-related baseplate assembly protein {ECO:0000313|EMBL:BAF88155.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
scnpilot_solids2_trim150_scaffold_764_13
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7015..7650
DNA (636bp) protein (212aa)
Putative bacteriophage P2-related tail formation protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I7T0_AZOC5
gpI; bacteriophage P2-related tail formation protein
Putative bacteriophage P2-related tail formation protein {ECO:0000313|EMBL:BAF88156.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
scnpilot_solids2_trim150_scaffold_764_14
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7666..9969
DNA (2304bp) protein (768aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I7T3_AZOC5 rbh
Uncharacterized protein {ECO:0000313|EMBL:KAI94094.1}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_764_15
unknown

Not on your lists

9974..10180
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_764_16
Mesorhizobium sp. L2C067A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10152..11393
DNA (1242bp) protein (414aa)
UPI0003CF337A related cluster n=2 Tax=unknown RepID=UPI0003CF337A
Uncharacterized protein {ECO:0000313|EMBL:ESZ37562.1}; TaxID=1287106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C067A000.;"
prophage MuMc02 head decoration protein
scnpilot_solids2_trim150_scaffold_764_17
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11390..11914
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G7C3_HERAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL62410.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
scnpilot_solids2_trim150_scaffold_764_18
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11911..12216
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0KIL1_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJC77099.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_764_19
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12337..13554
DNA (1218bp) protein (406aa)
Phage-related tail sheath protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J632_POLGS rbh
gpFI; phage-related tail sheath protein; K06907 rbh
Phage-related tail sheath protein {ECO:0000313|EMBL:ADZ72396.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
scnpilot_solids2_trim150_scaffold_764_20
unknown

Not on your lists

13573..14112
DNA (540bp) protein (180aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_764_21
unknown

Not on your lists

14109..14528
DNA (420bp) protein (140aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_764_22
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14676..17114
DNA (2439bp) protein (813aa)
Putative phage-related tail protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I7U7_AZOC5 rbh
phage-related tail protein rbh
Putative phage-related tail protein {ECO:0000313|EMBL:BAF88163.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
scnpilot_solids2_trim150_scaffold_764_23
Brucella sp. BO2, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17114..17545
DNA (432bp) protein (144aa)
Phage tail protein n=1 Tax=Brucella sp. BO2 RepID=E2PRQ1_9RHIZ
Phage tail protein {ECO:0000313|EMBL:EFM58339.1}; TaxID=693750 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. BO2.;"
phage tail protein; K06906
scnpilot_solids2_trim150_scaffold_764_24
unknown

Not on your lists

17542..17757
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_764_25
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17759..18808
DNA (1050bp) protein (350aa)
Phage late control protein D3 n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J626_POLGS
gpD3; phage late control protein D3; K06905
Phage late control protein D3 {ECO:0000313|EMBL:ADZ72390.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
scnpilot_solids2_trim150_scaffold_764_26
unknown

Not on your lists

18808..18951
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_764_27
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18952..19953
DNA (1002bp) protein (334aa)
D12 class N6 adenine-specific DNA methyltransferase; K06223 DNA adenine methylase [EC:2.1.1.72] rbh
DNA methyltransferase n=1 Tax=Sinorhizobium medicae RepID=UPI0003742DE8 rbh
Site-specific DNA methylase {ECO:0000313|EMBL:CDP52577.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
scnpilot_solids2_trim150_scaffold_764_28
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19935..21206)
DNA (1272bp) protein (424aa)
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-); K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
ATP-dependent DNA helicase RecQ n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FIV7_PELBH
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EYD75334.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
scnpilot_solids2_trim150_scaffold_764_29
bacterium YEK0313, Bacteria

Not on your lists

21311..21733
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037179AF
HTH-type transcriptional repressor NsrR {ECO:0000313|EMBL:CEJ12442.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
BadM/Rrf2 family transcriptional regulator; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
Displaying items 1-30 of 35 in total

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