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scnpilot_solids2_trim150_scaffold_312

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_312_1
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

221..2197
DNA (1977bp) protein (659aa)
Methyltransferase domain protein n=3 Tax=Bacteria RepID=E2T5P3_9RALS rbh
Uncharacterized protein {ECO:0000313|EMBL:EGY61047.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
methyltransferase type 11 rbh
scnpilot_solids2_trim150_scaffold_312_2
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2251..2718
DNA (468bp) protein (156aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=F4GH06_ALIDK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EGY61046.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
scnpilot_solids2_trim150_scaffold_312_3
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2732..3181
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDI0_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM44305.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids2_trim150_scaffold_312_4
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3225..3443
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Ralstonia RepID=E2T5P0_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EGY61044.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_312_5
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3999..4493
DNA (495bp) protein (165aa)
DNA repair protein RadC n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDH8_ACISJ rbh
DNA repair protein RadC rbh
DNA repair protein RadC {ECO:0000313|EMBL:ABM44303.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids2_trim150_scaffold_312_6
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4665..4994
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Ralstonia RepID=E2T5N8_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EGY61042.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_312_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5009..5335
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GH11_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB87131.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids2_trim150_scaffold_312_8
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5348..5584
DNA (237bp) protein (79aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=F4GH12_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGY61040.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
scnpilot_solids2_trim150_scaffold_312_9
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5592..6209
DNA (618bp) protein (206aa)
Resolvase, N-terminal domain n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDH4_ACISJ rbh
resolvase domain-containing protein rbh
Resolvase, N-terminal domain {ECO:0000313|EMBL:ABM44299.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids2_trim150_scaffold_312_10
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6843..7136)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDH3_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM44298.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids2_trim150_scaffold_312_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7657..7977)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GH16_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB87136.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids2_trim150_scaffold_312_12
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8290..8667
DNA (378bp) protein (126aa)
Uncharacterized protein n=4 Tax=Burkholderiales RepID=A1WDH1_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM44296.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids2_trim150_scaffold_312_13
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8669..10666
DNA (1998bp) protein (666aa)
Type IV secretion system, TraD, DNA-binding domain protein n=3 Tax=Burkholderiales RepID=F4GGS9_ALIDK rbh
Type IV conjugative transfer system coupling protein TraD {ECO:0000313|EMBL:EGY61034.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
type IV secretion system protein TraD rbh
scnpilot_solids2_trim150_scaffold_312_14
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10678..11133
DNA (456bp) protein (152aa)
Putative thiol:disulfide interchange transmembrane protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDG9_ACISJ
putative thiol:disulfide interchange transmembrane protein
Putative thiol:disulfide interchange transmembrane protein {ECO:0000313|EMBL:ABM44294.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids2_trim150_scaffold_312_15
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11130..14015
DNA (2886bp) protein (962aa)
Conjugative relaxase domain protein n=2 Tax=Ralstonia RepID=E2T5M9_9RALS rbh
Conjugative relaxase domain-containing protein {ECO:0000313|EMBL:EGY61032.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
conjugative relaxase domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_312_16
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14157..14369
DNA (213bp) protein (71aa)
Uncharacterized protein n=2 Tax=Burkholderiales RepID=F4GGT2_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGY61031.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
scnpilot_solids2_trim150_scaffold_312_17
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14460..15314
DNA (855bp) protein (285aa)
YheO-like domain-containing protein n=2 Tax=Burkholderiales RepID=F4GGT3_ALIDK rbh
YheO-like domain-containing protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EGY61030.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
scnpilot_solids2_trim150_scaffold_312_18
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15347..15622
DNA (276bp) protein (92aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=F4GGT4_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGY61029.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
scnpilot_solids2_trim150_scaffold_312_19
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15664..16599
DNA (936bp) protein (312aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDG5_ACISJ rbh
integral membrane sensor signal transduction histidine kinase rbh
Uncharacterized protein {ECO:0000313|EMBL:EGY61028.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
scnpilot_solids2_trim150_scaffold_312_20
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16568..17227)
DNA (660bp) protein (220aa)
Two component transcriptional regulator, LuxR family n=4 Tax=Burkholderiales RepID=A1WDG4_ACISJ rbh
two component LuxR family transcriptional regulator rbh
Uncharacterized protein {ECO:0000313|EMBL:EGY61027.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
scnpilot_solids2_trim150_scaffold_312_21
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17713..18213
DNA (501bp) protein (167aa)
Lytic transglycosylase, catalytic n=3 Tax=Burkholderiales RepID=A1WDG3_ACISJ rbh
lytic transglycosylase, catalytic rbh
Uncharacterized protein {ECO:0000313|EMBL:EGY61026.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
scnpilot_solids2_trim150_scaffold_312_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18215..18598
DNA (384bp) protein (128aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=A1WDG2_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB87058.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids2_trim150_scaffold_312_23
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18693..19025
DNA (333bp) protein (111aa)
Uncharacterized protein n=4 Tax=Burkholderiales RepID=A1WDG1_ACISJ
Conjugal transfer protein TrbC
Uncharacterized protein {ECO:0000313|EMBL:ABM44286.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids2_trim150_scaffold_312_24
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19041..19334
DNA (294bp) protein (98aa)
TraL n=4 Tax=Burkholderiales RepID=A1WDG0_ACISJ
type IV conjugative transfer system protein TraL; K12068 conjugal transfer pilus assembly protein TraL
TraL {ECO:0000313|EMBL:ABM44285.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids2_trim150_scaffold_312_25
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19350..19943
DNA (594bp) protein (198aa)
Uncharacterized protein n=4 Tax=Burkholderiales RepID=A1WDF9_ACISJ rbh
hypothetical protein; K12067 conjugal transfer pilus assembly protein TraE rbh
Uncharacterized protein {ECO:0000313|EMBL:ABM44284.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids2_trim150_scaffold_312_26
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20053..20616
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Burkholderiales RepID=F4GGU2_ALIDK rbh
hypothetical protein; K12066 conjugal transfer pilus assembly protein TraK rbh
Uncharacterized protein {ECO:0000313|EMBL:EGY61021.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
scnpilot_solids2_trim150_scaffold_312_27
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20609..21958
DNA (1350bp) protein (450aa)
TraB pilus assembly family protein n=4 Tax=Burkholderiales RepID=A1WDF7_ACISJ rbh
conjugation TrbI family protein; K12065 conjugal transfer pilus assembly protein TraB rbh
Uncharacterized protein {ECO:0000313|EMBL:EGY61020.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
scnpilot_solids2_trim150_scaffold_312_28
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21951..22700
DNA (750bp) protein (250aa)
disulfide bond isomerase, DsbC/G; K03981 thiol:disulfide interchange protein DsbC [EC:5.3.4.1] rbh
Protein-disulfide isomerase n=4 Tax=Burkholderiales RepID=A1WDF6_ACISJ rbh
Protein-disulfide isomerase {ECO:0000313|EMBL:ABM44281.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids2_trim150_scaffold_312_29
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22697..22846
DNA (150bp) protein (50aa)
Uncharacterized protein n=2 Tax=Burkholderiales RepID=F4GGU5_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGY61018.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
scnpilot_solids2_trim150_scaffold_312_30
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22843..23493
DNA (651bp) protein (217aa)
Type IV conjugative transfer system protein TraV n=3 Tax=Burkholderiales RepID=F4GGU6_ALIDK rbh
type IV conjugative transfer system protein TraV; K12064 conjugal transfer pilus assembly protein TraV rbh
Type IV conjugative transfer system protein TraV {ECO:0000313|EMBL:AEB87066.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Displaying items 1-30 of 63 in total

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