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scnpilot_solids1_trim150_scaffold_3816_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3816_curated_1
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(150..491)
DNA (342bp) protein (114aa)
RNA polymerase-binding protein RbpA n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAL6_NAKMY
hypothetical protein
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_3816_curated_2
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(628..1392)
DNA (765bp) protein (255aa)
tdk; Thymidine kinase (EC:2.7.1.21)
Thymidine kinase {ECO:0000313|EMBL:CCH31587.1}; EC=2.7.1.21 {ECO:0000313|EMBL:CCH31587.1};; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
Thymidine kinase n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K220_SACES
scnpilot_solids1_trim150_scaffold_3816_curated_3
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(1436..2191)
DNA (756bp) protein (252aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAL4_NAKMY
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:ACV79267.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_3816_curated_4
unknown

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2837..3475
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B43111
scnpilot_solids1_trim150_scaffold_3816_curated_5
unknown

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3824..4492
DNA (669bp) protein (223aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_3816_curated_6
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4586..5236)
DNA (651bp) protein (217aa)
Sugar phosphatase YfbT {ECO:0000313|EMBL:KJL29039.1}; EC=3.1.3.23 {ECO:0000313|EMBL:KJL29039.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040) RepID=D5UUV1_TSUPD
HAD-superfamily hydrolase
scnpilot_solids1_trim150_scaffold_3816_curated_7
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(5303..6613)
DNA (1311bp) protein (437aa)
Glucose sorbosone dehydrogenase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X7S0_NAKMY
glucose sorbosone dehydrogenase
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:ACV80923.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_3816_curated_8
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6613..8082)
DNA (1470bp) protein (490aa)
major facilitator transporter n=1 Tax=Humibacter albus RepID=UPI0003B2E82A
Major facilitator transporter {ECO:0000313|EMBL:EWT07958.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
MFS transporter, sugar porter family
scnpilot_solids1_trim150_scaffold_3816_curated_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(8193..8531)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIS9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43166.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
scnpilot_solids1_trim150_scaffold_3816_curated_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8528..9640)
DNA (1113bp) protein (371aa)
hypothetical protein id=12495526 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
glycosyl hydrolase BNR repeat-containing protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids1_trim150_scaffold_3816_curated_11
Deinococcus phoenicis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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9802..10677
DNA (876bp) protein (292aa)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; TaxID=1476583 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus phoenicis.;"
nadE; NAD synthetase; K01916 NAD+ synthase [EC:6.3.1.5]
NH(3)-dependent NAD(+) synthetase n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=NADE_DEIGD
scnpilot_solids1_trim150_scaffold_3816_curated_12
Gammaproteobacteria bacterium MFB021, Gammaproteobacteria, Proteobacteria, Bacteria

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10722..11018
DNA (297bp) protein (99aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;"
thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45]
Thymidylate synthase n=1 Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5UNR2_9MICO
Displaying 12 items

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