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scnpilot_solids1_trim150_scaffold_837_curated

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_837_curated_1
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..1300)
DNA (1299bp) protein (433aa)
Peptidase M20 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X8Q9_NAKMY
hypothetical protein
Peptidase M20 {ECO:0000313|EMBL:ACV79114.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_837_curated_2
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1435..2355
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B428E4
Uncharacterized protein {ECO:0000313|EMBL:KJK58260.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_837_curated_3
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2804..3469)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI000367E9D9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB42410.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
scnpilot_solids1_trim150_scaffold_837_curated_4
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3453..4751)
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI000362CEAC
Uncharacterized protein {ECO:0000313|EMBL:AJE42962.1}; TaxID=40318 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_837_curated_5
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4748..5500)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI00036159A2
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:AEB42412.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
scnpilot_solids1_trim150_scaffold_837_curated_6
unknown

Not on your lists

comp(5573..5953)
DNA (381bp) protein (127aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_837_curated_7
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7099..8550)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JZP5_STREN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW94127.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
scnpilot_solids1_trim150_scaffold_837_curated_8
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8547..9287)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WT81_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAB97051.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
scnpilot_solids1_trim150_scaffold_837_curated_9
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9284..9817)
DNA (534bp) protein (178aa)
Putative RNA polymerase ECF-subfamily sigma factor n=1 Tax=Patulibacter medicamentivorans RepID=H0E9S6_9ACTN
Putative RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:AIY18993.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids1_trim150_scaffold_837_curated_10
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9821..10873)
DNA (1053bp) protein (351aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UFR1_CELFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG73020.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
scnpilot_solids1_trim150_scaffold_837_curated_11
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10885..11487)
DNA (603bp) protein (201aa)
ABC transporter related protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UFR2_CELFN
Leucobacter komagatae strain VKM ST2845 L_komagatae_02, whole genome shotgun sequence {ECO:0000313|EMBL:KIP53597.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
ABC transporter
scnpilot_solids1_trim150_scaffold_837_curated_12
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11478..12515)
DNA (1038bp) protein (346aa)
Putative peptidoglycan-binding domain-containing protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XJX7_9MICO
Putative peptidoglycan-binding domain-containing protein {ECO:0000313|EMBL:GAD33470.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_837_curated_13
unknown

Not on your lists

comp(12512..12925)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B4955B
scnpilot_solids1_trim150_scaffold_837_curated_14
unknown

Not on your lists

comp(13163..13513)
DNA (351bp) protein (117aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_837_curated_15
Streptomyces sp. PAMC26508, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13786..14382
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036D42CA
RNA polymerase ECF-subfamily sigma factor
RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:AGJ54600.1}; TaxID=1265601 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PAMC26508.;"
scnpilot_solids1_trim150_scaffold_837_curated_16
unknown

Not on your lists

14433..14966
DNA (534bp) protein (178aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_837_curated_17
unknown

Not on your lists

15008..15508
DNA (501bp) protein (167aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_837_curated_18
Brevibacterium casei, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16180..19623
DNA (3444bp) protein (1148aa)
TrwC relaxase n=1 Tax=Brevibacterium casei S18 RepID=K9AM83_9MICO
TrwC relaxase {ECO:0000313|EMBL:EKU48473.1}; TaxID=1229781 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium casei S18.;"
TrwC relaxase
scnpilot_solids1_trim150_scaffold_837_curated_19
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19677..19931
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Brachybacterium paraconglomeratum RepID=UPI00026C69C3
Uncharacterized protein {ECO:0000313|EMBL:GAB95289.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
scnpilot_solids1_trim150_scaffold_837_curated_20
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19928..20245
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XH88_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK38096.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
scnpilot_solids1_trim150_scaffold_837_curated_21
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20282..20500)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Nesterenkonia alba RepID=UPI0003B39C8C
DNA binding domain, excisionase family {ECO:0000313|EMBL:EZP32905.1}; TaxID=1270 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (Micrococcus lysodeikticus).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_837_curated_22
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20594..21169
DNA (576bp) protein (192aa)
DNA-binding protein n=1 Tax=Nesterenkonia alba RepID=UPI0003B6657C
Uncharacterized protein {ECO:0000313|EMBL:CDP48112.1}; TaxID=66712 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii subsp. freudenreichii.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_837_curated_23
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21241..22512
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Nesterenkonia alba RepID=UPI0003B6D4FC
Uncharacterized protein {ECO:0000313|EMBL:EXJ51276.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
int; site-specific recombinase
Displaying 23 items

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