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scnpilot_solids1_trim150_scaffold_773_curated

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_773_curated_1
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..1089
DNA (1089bp) protein (363aa)
pyruvate dehydrogenase (EC:1.2.4.1); K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
Transketolase, C-terminal domain protein n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JP80_RHOER
Transketolase, C-terminal domain protein {ECO:0000313|EMBL:EEN86690.1}; TaxID=596309 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis SK121.;"
scnpilot_solids1_trim150_scaffold_773_curated_2
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1123..2496
DNA (1374bp) protein (458aa)
dehydrogenase catalytic domain-containing protein; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
Putative pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SAS0_9ACTO
Putative pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase {ECO:0000313|EMBL:EFQ83466.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
scnpilot_solids1_trim150_scaffold_773_curated_3
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2946..3503
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00037DF2D6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH08416.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
scnpilot_solids1_trim150_scaffold_773_curated_4
Streptomyces sp. JS01, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3561..4517)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Streptomyces sp. MspMP-M5 RepID=UPI000364A359
Mycothiol maleylpyruvate isomerase {ECO:0000313|EMBL:KFK89637.1}; TaxID=1525753 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. JS01.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_773_curated_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4501..5004)
DNA (504bp) protein (168aa)
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen n=1 Tax=Rhodanobacter denitrificans RepID=I4WXM4_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_773_curated_6
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5272..5766
DNA (495bp) protein (165aa)
Transcriptional regulator, CarD family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAB2_NAKMY
CarD family transcriptional regulator; K07736 CarD family transcriptional regulator
Transcriptional regulator, CarD family {ECO:0000313|EMBL:ACV77277.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_773_curated_7
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5776..7086)
DNA (1311bp) protein (437aa)
Major facilitator superfamily MFS_1 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAB4_NAKMY
major facilitator superfamily protein; K03449 MFS transporter, CP family, cyanate transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACV77279.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_773_curated_8
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7162..8013
DNA (852bp) protein (284aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2]
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104)
Pyrroline-5-carboxylate reductase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAE4_NAKMY
scnpilot_solids1_trim150_scaffold_773_curated_9
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8170..8430
DNA (261bp) protein (87aa)
DNA binding domain protein, excisionase family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAF7_NAKMY
excisionase family DNA binding domain-containing protein
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:ACV77322.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_773_curated_10
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8587..8688
DNA (102bp) protein (34aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAF8_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV77323.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_773_curated_11
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8879..9781)
DNA (903bp) protein (301aa)
sugar ABC transporter permease n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B727D7
sugar ABC transporter permease; K10202 N-acetylglucosamine transport system permease protein
Sugar ABC transporter permease protein {ECO:0000313|EMBL:BAK36073.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
scnpilot_solids1_trim150_scaffold_773_curated_12
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9781..11262)
DNA (1482bp) protein (494aa)
sugar ABC transporter permease n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B5CE29
Transmembrane transport protein {ECO:0000313|EMBL:EMF24007.1}; TaxID=1284664 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gancidicus BKS 13-15.;"
ABC-type sugar transport system, permease component; K10201 N-acetylglucosamine transport system permease protein
scnpilot_solids1_trim150_scaffold_773_curated_13
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11392..12894)
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B7AB99
Uncharacterized protein {ECO:0000313|EMBL:KGN37537.1}; TaxID=1385521 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
sugar ABC transporter substrate-binding protein; K10200 N-acetylglucosamine transport system substrate-binding protein
scnpilot_solids1_trim150_scaffold_773_curated_14
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12891..13688)
DNA (798bp) protein (266aa)
sugar isomerase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B462FA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ82238.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
scnpilot_solids1_trim150_scaffold_773_curated_15
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13681..14619)
DNA (939bp) protein (313aa)
sugar isomerase n=1 Tax=Humibacter albus RepID=UPI0003B6FE19
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:AIY02417.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
RpiR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_773_curated_16
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14858..15547
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036F35CD
LmbE family protein
LmbE family protein {ECO:0000313|EMBL:ADD42437.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
scnpilot_solids1_trim150_scaffold_773_curated_17
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15544..16800
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000363BD04
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD42431.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
scnpilot_solids1_trim150_scaffold_773_curated_18
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16813..17787
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00035C87FE
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADD42433.1}; Flags: Precursor;; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
scnpilot_solids1_trim150_scaffold_773_curated_19
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17802..18944
DNA (1143bp) protein (381aa)
ATPase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B7635B
BadF/BadG/BcrA/BcrD ATPase family protein {ECO:0000313|EMBL:EGD40578.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
BadF/BadG/BcrA/BcrD type ATPase
scnpilot_solids1_trim150_scaffold_773_curated_20
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19001..19909)
DNA (909bp) protein (303aa)
HAD-superfamily subfamily IB hydrolase, TIGR01490 n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XER2_9PSEU
HAD-superfamily subfamily IB hydrolase, TIGR01490 {ECO:0000313|EMBL:EHR59291.1}; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
HAD-superfamily subfamily IB hydrolase
scnpilot_solids1_trim150_scaffold_773_curated_21
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19981..21783
DNA (1803bp) protein (601aa)
AMP-dependent synthetase and ligase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAG2_NAKMY
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACV77327.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_773_curated_22
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21806..22153
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Geobacter sulfurreducens RepID=D7AGF3_GEOSK
hypothetical protein
Uroporphyrin-III methyltransferase {ECO:0000313|EMBL:AJY69692.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
scnpilot_solids1_trim150_scaffold_773_curated_23
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22256..23428
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Actinoalloteichus spitiensis RepID=UPI00036DF97B
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KJK58909.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
acyl-CoA dehydrogenase domain-containing protein
scnpilot_solids1_trim150_scaffold_773_curated_24
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23425..23691
DNA (267bp) protein (89aa)
glutaredoxin n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF260
Glutaredoxin-like protein {ECO:0000313|EMBL:KJE23213.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
glutaredoxin 2
scnpilot_solids1_trim150_scaffold_773_curated_25
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23834..24586
DNA (753bp) protein (251aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAG4_NAKMY
redox-sensing transcriptional repressor Rex; K01926 redox-sensing transcriptional repressor
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_773_curated_26
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24625..26163
DNA (1539bp) protein (513aa)
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAG5_NAKMY
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase {ECO:0000313|EMBL:ACV77330.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_773_curated_27
unknown

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26642..27100
DNA (459bp) protein (153aa)

This feature has no annotations

Displaying 27 items

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