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scnpilot_solids1_trim150_scaffold_678_curated

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_678_curated_1
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(281..940)
DNA (660bp) protein (220aa)
methylated-DNA/protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Variovorax paradoxus RepID=UPI000375934A
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_solids1_trim150_scaffold_678_curated_2
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1024..1605
DNA (582bp) protein (194aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1773 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis.;"
deoxycytidine triphosphate deaminase n=1 Tax=Longispora albida RepID=UPI000368BC65
dcd; hypothetical protein
scnpilot_solids1_trim150_scaffold_678_curated_3
unknown

Not on your lists

1761..1988
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_678_curated_4
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

1985..2410
DNA (426bp) protein (142aa)
Ribonuclease VapC n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GWL1_9ACTO
Conserved protein of unknown function with PIN domain, possible toxin
Tax=RBG_16_RIF_CHLX_72_14_curated
scnpilot_solids1_trim150_scaffold_678_curated_5
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2498..3334)
DNA (837bp) protein (279aa)
ABC-2 type transporter n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCD1_NAKMY
ABC transporter; K09686 antibiotic transport system permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_678_curated_6
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3331..4302)
DNA (972bp) protein (324aa)
ABC transporter n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5FE14
multidrug ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAK34666.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
scnpilot_solids1_trim150_scaffold_678_curated_7
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4821..6845)
DNA (2025bp) protein (675aa)
Glycoside hydrolase 15-related n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCB3_NAKMY
glycoside hydrolase 15-like protein
Glycoside hydrolase 15-related {ECO:0000313|EMBL:ACV81507.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_678_curated_8
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6916..7824
DNA (909bp) protein (303aa)
membrane protein n=1 Tax=Amycolatopsis methanolica RepID=UPI000361E47F
Membrane protein {ECO:0000313|EMBL:KHD75020.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_678_curated_9
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7935..9527
DNA (1593bp) protein (531aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI000361C563
MFS transporter {ECO:0000313|EMBL:GAM50012.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
major facilitator superfamily protein
scnpilot_solids1_trim150_scaffold_678_curated_10
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9630..11357
DNA (1728bp) protein (576aa)
Sensory box/GGDEF family protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KQ85_9BURK
Diguanylate phosphodiesterase {ECO:0000313|EMBL:EYC50386.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
sensor diguanylate cyclase/phosphodiesterase, PAS domain-containing
scnpilot_solids1_trim150_scaffold_678_curated_11
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11392..13470)
DNA (2079bp) protein (693aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCB7_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV81511.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_678_curated_12
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13991..15871
DNA (1881bp) protein (627aa)
Chaperone protein DnaK n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XC90_NAKMY
chaperone protein DnaK; K04043 molecular chaperone DnaK
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_678_curated_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15868..16677
DNA (810bp) protein (270aa)
Protein GrpE n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XC89_NAKMY
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_678_curated_14
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16708..17916
DNA (1209bp) protein (403aa)
Chaperone protein DnaJ n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XC88_NAKMY
chaperone protein DnaJ; K03686 molecular chaperone DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_678_curated_15
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17913..18446
DNA (534bp) protein (178aa)
Transcriptional regulator, MerR family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XC87_NAKMY
MerR family transcriptional regulator; K13640 MerR family transcriptional regulator, heat shock protein HspR
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ACV81481.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_678_curated_16
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18755..19156
DNA (402bp) protein (134aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
Ribonuclease VapC n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8LGG9_FRASN
PilT domain-containing protein; K07062
scnpilot_solids1_trim150_scaffold_678_curated_17
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19323..20204
DNA (882bp) protein (294aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
DNA-(Apurinic or apyrimidinic site) lyase {ECO:0000313|EMBL:ACV76643.1}; EC=4.2.99.18 {ECO:0000313|EMBL:ACV76643.1};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJW0_NAKMY
scnpilot_solids1_trim150_scaffold_678_curated_18
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20404..23013
DNA (2610bp) protein (870aa)
ATP-dependent chaperone ClpB n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XC66_NAKMY
ATP-dependent chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_678_curated_19
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23082..25319)
DNA (2238bp) protein (746aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI00037B905C
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ADB76008.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
scnpilot_solids1_trim150_scaffold_678_curated_20
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25432..26706
DNA (1275bp) protein (425aa)
Aminotransferase class I and II n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBA8_NAKMY
class I and II aminotransferase
Aminotransferase class I and II {ECO:0000313|EMBL:ACV81400.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_678_curated_21
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26862..27035
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Saccharomonospora halophila RepID=UPI00037DB835
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV81389.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_678_curated_22
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27032..27688)
DNA (657bp) protein (219aa)
Hydrolase of the HAD superfamily n=3 Tax=Amycolatopsis mediterranei RepID=G0FRZ1_AMYMS
hydrolase of the HAD superfamily
Hydrolase of the HAD superfamily protein {ECO:0000313|EMBL:AEK47775.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
scnpilot_solids1_trim150_scaffold_678_curated_23
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27843..29018
DNA (1176bp) protein (392aa)
class I and II aminotransferase protein; K14155 cystathione beta-lyase [EC:4.4.1.8]
aminotransferase class I/II n=1 Tax=Ruania albidiflava RepID=UPI0003B67857
Aminotransferase class I/II {ECO:0000313|EMBL:KII00049.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
scnpilot_solids1_trim150_scaffold_678_curated_24
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29033..29953)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRV8_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK37171.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
scnpilot_solids1_trim150_scaffold_678_curated_25
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30083..30628
DNA (546bp) protein (182aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XB70_NAKMY
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACV81362.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_678_curated_26
Yarrowia lipolytica, Yarrowia, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

30944..31693
DNA (750bp) protein (250aa)
YALI0D24365p n=1 Tax=Yarrowia lipolytica (strain CLIB 122 / E 150) RepID=Q6C7Y4_YARLI
YALI0D24365p
YALI0D24365p {ECO:0000313|EMBL:CAG81429.1}; TaxID=284591 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia.;" source="Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida; lipolytica).;"
scnpilot_solids1_trim150_scaffold_678_curated_27
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31922..32839)
DNA (918bp) protein (306aa)
Cation diffusion facilitator family transporter n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BRR8_XYLCX
cation diffusion facilitator family transporter; K03295 cation efflux system protein, CDF family
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ACZ32334.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
scnpilot_solids1_trim150_scaffold_678_curated_28
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32987..34426
DNA (1440bp) protein (480aa)
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2]
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Adenylosuccinate lyase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XB65_NAKMY
scnpilot_solids1_trim150_scaffold_678_curated_29
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34455..35120
DNA (666bp) protein (222aa)
GCN5-related protein N-acetyltransferase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BUT9_BEUC1
N-acetyltransferase GCN5
GCN5-related protein N-acetyltransferase {ECO:0000313|EMBL:ACQ78313.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
scnpilot_solids1_trim150_scaffold_678_curated_30
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35221..35961
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Streptomyces sp. ATexAB-D23 RepID=UPI0003651AEC
MgtC family magnesium transporter {ECO:0000313|EMBL:ETK31869.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein
Displaying items 1-30 of 76 in total

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