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scnpilot_solids1_trim150_scaffold_378_curated

Search features with annotation key words

Displaying items 31-60 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_378_curated_31
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31438..32583
DNA (1146bp) protein (382aa)
flagellar motor switch protein FliG n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B37231
Flagellar motor switch protein FliG {ECO:0000313|EMBL:EXG80977.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
flagellar motor switch protein FliG; K02410 flagellar motor switch protein FliG
scnpilot_solids1_trim150_scaffold_378_curated_32
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32567..33379
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037D2E40
Flagellar assembly protein {ECO:0000313|EMBL:KHD72553.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
fliH; flagellar assembly protein FliH; K02411 flagellar assembly protein FliH
scnpilot_solids1_trim150_scaffold_378_curated_33
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33376..34833
DNA (1458bp) protein (486aa)
FliI/YscN family ATPase (EC:3.6.3.15); K02412 flagellum-specific ATP synthase [EC:3.6.3.14]
ATPase, FliI/YscN family {ECO:0000313|EMBL:ACU36284.1}; EC=3.6.3.15 {ECO:0000313|EMBL:ACU36284.1};; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
ATP synthase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B749AF
scnpilot_solids1_trim150_scaffold_378_curated_34
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34830..35366
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LR75_BURGS
mucin-associated surface protein (MASP)
Uncharacterized protein {ECO:0000313|EMBL:AEA65321.1}; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (strain BSR3).;"
scnpilot_solids1_trim150_scaffold_378_curated_35
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35363..36691
DNA (1329bp) protein (443aa)
Putative transglycosylase n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6X157_9MICO
Putative transglycosylase {ECO:0000313|EMBL:GAB98107.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
cell wall-associated hydrolase
scnpilot_solids1_trim150_scaffold_378_curated_36
Arctogadus glacialis, Arctogadus, Gadiformes, Neopterygii, Chordata, Metazoa

Not on your lists

36688..38223
DNA (1536bp) protein (512aa)
Uncharacterized protein n=1 Tax=Eimeria maxima RepID=U6M9K4_EIMMA
Antifreeze glycoprotein {ECO:0000313|EMBL:AAQ09569.1}; TaxID=185735 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Arctogadus.;" source="Arctogadus glacialis (Arctic cod).;"
algP; putative alginate regulatory protein AlgP
scnpilot_solids1_trim150_scaffold_378_curated_37
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38239..38934
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037D2D1F
Flagellar hook capping protein {ECO:0000313|EMBL:KGM08846.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
flagellar hook capping protein; K02389 flagellar basal-body rod modification protein FlgD
scnpilot_solids1_trim150_scaffold_378_curated_38
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38965..39873
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WJQ4_ACTMD
hypothetical protein; K02390 flagellar hook protein FlgE
Uncharacterized protein {ECO:0000313|EMBL:ACU36279.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
scnpilot_solids1_trim150_scaffold_378_curated_39
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40174..40479
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000370D28D
flbD; flagellar protein FlbD
Flagellar protein FlbD {ECO:0000313|EMBL:AGZ46350.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
scnpilot_solids1_trim150_scaffold_378_curated_40
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40479..41246
DNA (768bp) protein (256aa)
flagellar motor protein MotA n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B526E6
MotA/TolQ/ExbB proton channel; K02556 chemotaxis protein MotA
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:ACU36277.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
scnpilot_solids1_trim150_scaffold_378_curated_41
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41247..42380
DNA (1134bp) protein (378aa)
flagellar motor protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B698B3
Chemotaxis protein motB; K02557 chemotaxis protein MotB
Chemotaxis protein motB {ECO:0000313|EMBL:AEV88801.1}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
scnpilot_solids1_trim150_scaffold_378_curated_42
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42400..42879
DNA (480bp) protein (160aa)
Flagellar basal body-associated protein FliL n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WJQ0_ACTMD
flagellar basal body-associated protein FliL; K02415 flagellar FliL protein
Flagellar basal body-associated protein FliL {ECO:0000313|EMBL:ACU36275.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
scnpilot_solids1_trim150_scaffold_378_curated_43
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43078..44007
DNA (930bp) protein (310aa)
flagellar motor switch protein FliM n=1 Tax=Actinoplanes globisporus RepID=UPI0003760118
fliM; Flagellar motor switch protein FliM
Flagellar motor switch protein FliM {ECO:0000313|EMBL:AGZ46354.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
scnpilot_solids1_trim150_scaffold_378_curated_44
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44084..44854
DNA (771bp) protein (257aa)
Flagellar motor switch protein FliN n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WE98_9ACTO
fliN; Flagellar motor switch protein FliN
Flagellar motor switch protein FliN {ECO:0000313|EMBL:AGZ46355.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
scnpilot_solids1_trim150_scaffold_378_curated_45
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44861..45343
DNA (483bp) protein (161aa)
Flagellar protein FliO/FliZ n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WEI3_9ACTO
fliO; flagellar protein FliO/FliZ
Flagellar protein FliO/FliZ {ECO:0000313|EMBL:AGZ46356.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
scnpilot_solids1_trim150_scaffold_378_curated_46
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45340..46278
DNA (939bp) protein (313aa)
fliP; flagellar biosynthesis protein FliP (EC:3.1.1.3); K02419 flagellar biosynthetic protein FliP
flagellar biosynthesis protein FliP n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4D0BF
Flagellar biosynthesis protein flip {ECO:0000313|EMBL:KGM08916.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
scnpilot_solids1_trim150_scaffold_378_curated_47
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

46288..46557
DNA (270bp) protein (90aa)
flagellar biosynthesis protein FliQ n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B34AFA
export protein FliQ; K02420 flagellar biosynthetic protein FliQ
Export protein FliQ, family 3 {ECO:0000313|EMBL:ABL80267.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
scnpilot_solids1_trim150_scaffold_378_curated_48
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

46602..47363
DNA (762bp) protein (254aa)
flagellar biosynthesis protein FliR n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B79F47
type III secretion system inner membrane R protein; K02421 flagellar biosynthetic protein FliR
Type III secretion system inner membrane R protein {ECO:0000313|EMBL:ACU36269.1}; Flags: Precursor;; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
scnpilot_solids1_trim150_scaffold_378_curated_49
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47360..48472
DNA (1113bp) protein (371aa)
type III secretion protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B58412
flhB; putative flagellar biosynthesis protein; K02401 flagellar biosynthetic protein FlhB
Putative flagellar biosynthesis protein {ECO:0000313|EMBL:BAL92856.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
scnpilot_solids1_trim150_scaffold_378_curated_50
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48485..49843)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XIZ6_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV76583.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_378_curated_51
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50081..52162
DNA (2082bp) protein (694aa)
flagellar biosynthesis protein FlhA n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B53F82
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:EXG80957.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
flhA; Flagellar biosynthesis protein flhA
scnpilot_solids1_trim150_scaffold_378_curated_52
Caenorhabditis japonica, Caenorhabditis, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

52137..54167
DNA (2031bp) protein (677aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B46044
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:CJA18316}; TaxID=281687 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhabditis japonica.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_378_curated_53
unknown

Not on your lists

54146..54382
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_378_curated_54
Mycobacterium hassiacum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54665..55858)
DNA (1194bp) protein (398aa)
Elongation factor Tu n=1 Tax=Mycobacterium hassiacum DSM 44199 RepID=K5BKH5_9MYCO
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1122247 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium hassiacum DSM 44199.;"
tuf; elongation factor Tu
scnpilot_solids1_trim150_scaffold_378_curated_55
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56156..58252)
DNA (2097bp) protein (699aa)
Elongation factor G n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCF9_NAKMY
elongation factor G; K02355 elongation factor G
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_378_curated_56
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(58433..58903)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCF8_NAKMY
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_378_curated_57
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(58903..59277)
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=1 Tax=Streptomyces scabrisporus RepID=UPI0003674E8C
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=2064 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
scnpilot_solids1_trim150_scaffold_378_curated_58
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(59727..63659)
DNA (3933bp) protein (1311aa)
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera mult
DNA-directed RNA polymerase subunit beta' n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBL0_NAKMY
scnpilot_solids1_trim150_scaffold_378_curated_59
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(63716..67207)
DNA (3492bp) protein (1164aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipar
DNA-directed RNA polymerase subunit beta n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBK9_NAKMY
scnpilot_solids1_trim150_scaffold_378_curated_60
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(67647..68042)
DNA (396bp) protein (132aa)
50S ribosomal protein L7/L12 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBG6_NAKMY
50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Displaying items 31-60 of 108 in total

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