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scnpilot_solids1_trim150_scaffold_1457_curated

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1457_curated_1
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..340
DNA (339bp) protein (113aa)
amidase; K01426 amidase [EC:3.5.1.4]
Amidase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X946_NAKMY
Amidase {ECO:0000313|EMBL:ACV81144.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_1457_curated_2
Tetrasphaera jenkinsii, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

534..1472
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X945_NAKMY
Uncharacterized protein {ECO:0000313|EMBL:CCI52317.1}; TaxID=1193518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera jenkinsii Ben 74.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1457_curated_3
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1692..1988
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X944_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV81142.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_1457_curated_4
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2047..2967)
DNA (921bp) protein (307aa)
CDP-diacylglycerol/serine O-phosphatidyltransferase (EC:2.7.8.8); K00998 phosphatidylserine synthase [EC:2.7.8.8]
CDP-diacylglycerol/serineO-phosphatidyltransfera se {ECO:0000313|EMBL:ACV81141.1}; EC=2.7.8.8 {ECO:0000313|EMBL:ACV81141.1};; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
CDP-diacylglycerol/serineO-phosphatidyltransfera se n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X943_NAKMY
scnpilot_solids1_trim150_scaffold_1457_curated_5
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2967..3722)
DNA (756bp) protein (252aa)
phosphatidylserine decarboxylase (EC:4.1.1.65); K01613 phosphatidylserine decarboxylase [EC:4.1.1.65]
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X942_NAKMY
scnpilot_solids1_trim150_scaffold_1457_curated_6
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3910..4692)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI0003715336
Copper homeostasis protein CutC {ECO:0000313|EMBL:KGH45661.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
CutC family protein; K06201 copper homeostasis protein
scnpilot_solids1_trim150_scaffold_1457_curated_7
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4767..5798)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036F4011
Asparaginase {ECO:0000313|EMBL:ETK37341.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1457_curated_8
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5832..6503)
DNA (672bp) protein (224aa)
Putative two-component response regulator n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WWP0_9MICO
Putative two-component response regulator {ECO:0000313|EMBL:GAB98246.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
scnpilot_solids1_trim150_scaffold_1457_curated_9
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6726..10745
DNA (4020bp) protein (1340aa)
hypothetical protein n=1 Tax=Rhodococcus rhodochrous RepID=UPI0003819382
XRE family transcriptional regulator
WD-40 repeat protein {ECO:0000313|EMBL:AKE00151.1}; TaxID=1833 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (Arthrobacter picolinophilus).;"
scnpilot_solids1_trim150_scaffold_1457_curated_10
Saccharomonospora xinjiangensis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11079..11333)
DNA (255bp) protein (85aa)
Putative membrane protein n=1 Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0V417_9PSEU
Putative membrane protein {ECO:0000313|EMBL:EID54870.1}; Flags: Precursor;; TaxID=882086 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora xinjiangensis XJ-54.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1457_curated_11
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11370..11627)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X914_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV81112.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_1457_curated_12
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11633..12931)
DNA (1299bp) protein (433aa)
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]
Molybdenum cofactor synthesis domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X907_NAKMY
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:ACV81105.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_1457_curated_13
unknown

Not on your lists

13148..13948
DNA (801bp) protein (267aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1457_curated_14
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13935..14390
DNA (456bp) protein (152aa)
NUDIX hydrolase n=1 Tax=Saccharopolyspora spinosa RepID=UPI00023791E2
NUDIX hydrolase {ECO:0000313|EMBL:ETK31206.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
NUDIX hydrolase
scnpilot_solids1_trim150_scaffold_1457_curated_15
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14436..15041)
DNA (606bp) protein (202aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQ44_NOCSJ
Amino acid transporter {ECO:0000313|EMBL:KGN37454.1}; TaxID=1385521 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
lysine exporter protein LysE/YggA; K06895 L-lysine exporter family protein LysE/ArgO
scnpilot_solids1_trim150_scaffold_1457_curated_16
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15112..15981
DNA (870bp) protein (290aa)
Chromosome replication initiation inhibitor protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TN29_9MICO
LysR family transcriptional regulator {ECO:0000313|EMBL:KGN35188.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
chromosome replication initiation inhibitor protein; K05596 LysR family transcriptional regulator, chromosome initiation inhibitor
scnpilot_solids1_trim150_scaffold_1457_curated_17
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16293..16949
DNA (657bp) protein (219aa)
60 kDa chaperonin n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X904_NAKMY
chaperonin GroEL; K04077 chaperonin GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Displaying 17 items

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