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scnpilot_solids1_trim150_scaffold_3568_curated_8

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(7891..9273)

Top 3 Functional Annotations

Value Algorithm Source
Signal transduction histidine kinase n=1 Tax=Frankia sp. QA3 RepID=I8R007_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 427.0
  • Bit_score: 362
  • Evalue 5.90e-97
Signal transduction histidine kinase {ECO:0000313|EMBL:KJE21249.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 438.0
  • Bit_score: 364
  • Evalue 1.70e-97
two-component system sensor kinase similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 441.0
  • Bit_score: 339
  • Evalue 1.30e-90

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Taxonomy

Frankia sp. CpI1-S → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1383
ATGAGCGATACGAGTGCGTACACCCTGGCCCGAACGGCCGAGAGACGGTTGACTATCCGGGGCCGCGCCGTCCCGGCATTCTTCGCGCCGCTGGTCACCCGCCGGGCGTGGTCCGAACTGGGCTACGCGCTGCTCGCACTGCCCGTCGGTATCGCAGGATTCGTGTTCACCGTGACGACCGTGTCGCTGTCCGTCGGCCTGGCCATCACCTTCGTGGGTCTCCCGCTGCTCGCGGTGACGGGCATCGCTAGTCGCTGGATGGGCGAAAGGTGGCGCAGAGCGACCAACGCGATGGTCGGCTGGGGTATCCAGAAGCCGCGCCGATTCTCGTCCGCCCCAGGGCTTTTCGGCTGGATCGGCGCGTCCCTCAAGGACGCGGTCGCCTGGCGTGCCCGCGCCTACGGGCTGCTGTCGCTGCCTCTGGGGACCCTGTCCTTCGTGGTGGCCGTCGTCTTCTACTCGGTGGCACTCGGCGCGATCACGTACTGGATCTGGGGCGGCTACCTCCCGTGCGACCCGGATCCGGCGGGGGTCGGCTGCCAGTCGGCGCCGTACCTGTGGATCGGCTACCGCGTCGAGACCCCGATCGCCATGTTCCTGTTCGCCCTCGAAGGCGTCGTCGTCCTGCTGCTCGCGCCGTGGGTGGTGCGCGGGGTGCTTGCGCTCGACAAGTTCTGCGCCACCGTGCTTCTCGGGGCCTCGCGGCGTGAGGCGGACCTGGAGCGAATCTCCGAGTTGGAGCACACCCGTGCCCAAACCGTGGACGATTCCGCAGCCACCCTGCGCCGCATCGAGCGGGATCTGCACGACGGCACCCAGGCGCGGTTGGTGGCGTTGGCCATGAACGTGGGGCTGGCCAAGGAGAAGCTGGCCGAGGACGGACCGTCACAGGAGGCGCTGGCCCTGCTGGACCGGGCGCATGCGACCGCCAAGGACGCGATCACCGAGGTGCGGGACCTTGCGCGCGGCATCCACCCCGCCGTGCTGGACACGGGGCTGGACACGGCGCTGGCGACCCTCGCCGCGCGCAGTCCCGTCCCGGTCGTCGTGGATGCGCACATCGGCCATCGGCCCGGGCCTGCCATCGAAACCATGGCGTACTTCTGCGCGGCGGAACTCGTCACCAACGCGGTGAAACACAGTGGTGCACAGGCGATCCGGATCGACGTGACGTCAACGGCCGAGGCGCTGACGCTGAGCGTGCAGGACGACGGTCACGGTGAGGCAGCGGTCGGGGCGCAGGGCGGCACCGGCCTGGTCGGTCTGCAGCAGCGGGTGCACAGCGTGGACGGCGTCATGATGATCGACTCGCCGCCGGGCGGGCCGACCGTGGTCACCGTGCGGCTGCCGCTGACGGCCTCCTCGAGCGGGGTGCGCTCGTGA
PROTEIN sequence
Length: 461
MSDTSAYTLARTAERRLTIRGRAVPAFFAPLVTRRAWSELGYALLALPVGIAGFVFTVTTVSLSVGLAITFVGLPLLAVTGIASRWMGERWRRATNAMVGWGIQKPRRFSSAPGLFGWIGASLKDAVAWRARAYGLLSLPLGTLSFVVAVVFYSVALGAITYWIWGGYLPCDPDPAGVGCQSAPYLWIGYRVETPIAMFLFALEGVVVLLLAPWVVRGVLALDKFCATVLLGASRREADLERISELEHTRAQTVDDSAATLRRIERDLHDGTQARLVALAMNVGLAKEKLAEDGPSQEALALLDRAHATAKDAITEVRDLARGIHPAVLDTGLDTALATLAARSPVPVVVDAHIGHRPGPAIETMAYFCAAELVTNAVKHSGAQAIRIDVTSTAEALTLSVQDDGHGEAAVGAQGGTGLVGLQQRVHSVDGVMMIDSPPGGPTVVTVRLPLTASSSGVRS*